RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	MCMDC2	Q4G0Z9	681 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	C6orf136	Q5SQH8	315 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	STXBP4	Q6ZWJ1	553 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ABI3BP	Q7Z7G0	1075 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TRPT1	Q86TN4	253 aa	Known RBP	3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	RTN4RL2	Q86UN3	420 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	METTL23	Q86XA0	190 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	THOC1	Q96FV9	657 aa	Known RBP	3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GBP5	Q96PP8	586 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SPAG5	Q96R06	1193 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	INTS14	Q96SY0	518 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ADPGK	Q9BRR6	497 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CDK19	Q9BWU1	502 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SLC2A11	Q9BYW1	496 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	RPS10P5	Q9NQ39	176 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PFDN4	Q9NQP4	134 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	MRGBP	Q9NV56	204 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TBC1D7	Q9P0N9	293 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ZNF624	Q9P2J8	865 aa	Predicted RBP	3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	RIPK3	Q9Y572	518 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TRIM17	Q9Y577	477 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	POMT1	Q9Y6A1	747 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PRSS21	Q9Y6M0	314 aa		3.19	□□□□□ -1.9
TMEM50B-208	ENST00000474272	BICRA	Q9NZM4	1560 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	RAPGEF2	Q9Y4G8	1499 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CCNB3	Q8WWL7	1395 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TRAV34	A0A0B4J273	112 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ARHGEF37	A1IGU5	675 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM86B1	E9PN63	330 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ZNF197	O14709	1029 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ATP6V0E1	O15342	81 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PRKRA	O75569	313 aa	Known RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM86B2	P0C5J1	330 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SAG	P10523	405 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ADRA2C	P18825	462 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SP100	P23497	879 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TLX1	P31314	330 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CRKL	P46109	303 aa	Known RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	LUM	P51884	338 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	DLK1	P80370	383 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	POU5F1	Q01860	360 aa	Known RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TAF10	Q12962	218 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TMEM187	Q14656	261 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	P2RY6	Q15077	328 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ODF4	Q2M2E3	257 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	XKR3	Q5GH77	459 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	MPP7	Q5T2T1	576 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	HECTD3	Q5T447	861 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	LCE3A	Q5TA76	89 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CYP4A22	Q5TCH4	519 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	MFSD6	Q6ZSS7	791 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	IL17REL	Q6ZVW7	336 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SH2D6	Q7Z4S9	175 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CDK20	Q8IZL9	346 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	LYG1	Q8N1E2	194 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	OR10Q1	Q8NGQ4	319 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	OR52N5	Q8NH56	324 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	OCC1	Q8TAD7	63 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM71F1	Q96KD3	344 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SPATA17	Q96L03	361 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FN3K	Q9H479	309 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SIX2	Q9NPC8	291 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ADPRHL2	Q9NX46	363 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	STUB1	Q9UNE7	303 aa		3.18	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CFTR	P13569	1480 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CASTOR2	A6NHX0	329 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ENO4	A6NNW6	628 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ARPC2	O15144	300 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ATP6AP2	O75787	350 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	NADK	O95544	446 aa	Predicted RBP	3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GSR	P00390	522 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	NGF	P01138	241 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GBA	P04062	536 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	FAM58BP	P0C7Q3	252 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PLA2G4B	P0C869	781 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PRSS56	P0CW18	603 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	IGHV4-31	P0DP07	118 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ERVK-10	P10266	1014 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	IRF2	P14316	349 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	PDGFRA	P16234	1089 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CDH3	P22223	829 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ACAT1	P24752	427 aa	Known RBP	3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	BMX	P51813	675 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CAPZA1	P52907	286 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	BFSP1	Q12934	665 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	GPR17	Q13304	367 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	ALDH1L2	Q3SY69	923 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	CCDC184	Q52MB2	194 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SHQ1	Q6PI26	577 aa	Known RBP	3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SPATA19	Q7Z5L4	167 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	KBTBD8	Q8NFY9	601 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	TRIM58	Q8NG06	486 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	OR4K1	Q8NGD4	311 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	SETD6	Q8TBK2	473 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	HCAR2	Q8TDS4	363 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	DEPDC1B	Q8WUY9	529 aa		3.17	□□□□□ -1.9
TMEM50B-208	ENST00000474272	NSL1	Q96IY1	281 aa		3.17	□□□□□ -1.9

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