RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 PYROXD1Q8WU10 500 aa19.4■□□□□ 0.7
APP-215ENST00000474136 AGAP4Q96P64 663 aa19.4■□□□□ 0.7
APP-215ENST00000474136 COG4Q9H9E3 785 aa19.4■□□□□ 0.7
APP-215ENST00000474136 ICKQ9UPZ9 632 aa19.4■□□□□ 0.7
APP-215ENST00000474136 H2AFXP16104 143 aaPredicted RBP19.39■□□□□ 0.69
APP-215ENST00000474136 MAGEA4P43358 317 aa19.39■□□□□ 0.69
APP-215ENST00000474136 ART3Q13508 389 aa19.39■□□□□ 0.69
APP-215ENST00000474136 BBS9Q3SYG4 887 aa19.39■□□□□ 0.69
APP-215ENST00000474136 B3GNTL1Q67FW5 361 aaPredicted RBP19.39■□□□□ 0.69
APP-215ENST00000474136 DENND5AQ6IQ26 1287 aa19.39■□□□□ 0.69
APP-215ENST00000474136 FAM180AQ6UWF9 173 aa19.39■□□□□ 0.69
APP-215ENST00000474136 MICALCLQ6ZW33 695 aa19.39■□□□□ 0.69
APP-215ENST00000474136 NLRP9Q7RTR0 991 aa19.39■□□□□ 0.69
APP-215ENST00000474136 GDF7Q7Z4P5 450 aa19.39■□□□□ 0.69
APP-215ENST00000474136 CATSPER1Q8NEC5 780 aa19.39■□□□□ 0.69
APP-215ENST00000474136 ITLN2Q8WWU7 325 aaPredicted RBP19.39■□□□□ 0.69
APP-215ENST00000474136 DCUN1D1Q96GG9 259 aa19.39■□□□□ 0.69
APP-215ENST00000474136 OR2A14Q96R47 310 aa19.39■□□□□ 0.69
APP-215ENST00000474136 FAM96AQ9H5X1 160 aa19.39■□□□□ 0.69
APP-215ENST00000474136 SAYSD1Q9NPB0 183 aa19.39■□□□□ 0.69
APP-215ENST00000474136 IRAK4Q9NWZ3 460 aa19.39■□□□□ 0.69
APP-215ENST00000474136 MYO7BQ6PIF6 2116 aa19.39■□□□□ 0.69
APP-215ENST00000474136 PKDREJQ9NTG1 2253 aa19.38■□□□□ 0.69
APP-215ENST00000474136 DOCK10Q96BY6 2186 aa19.38■□□□□ 0.69
APP-215ENST00000474136 IFRD1O00458 451 aaPredicted RBP19.38■□□□□ 0.69
APP-215ENST00000474136 SOCS6O14544 535 aa19.38■□□□□ 0.69
APP-215ENST00000474136 JRKO75564 520 aa19.38■□□□□ 0.69
APP-215ENST00000474136 TTC4O95801 387 aa19.38■□□□□ 0.69
APP-215ENST00000474136 GSTA2P09210 222 aa19.38■□□□□ 0.69
APP-215ENST00000474136 FAM153BP0C7A2 387 aa19.38■□□□□ 0.69
APP-215ENST00000474136 ITGAXP20702 1163 aa19.38■□□□□ 0.69
APP-215ENST00000474136 MMP11P24347 488 aa19.38■□□□□ 0.69
APP-215ENST00000474136 ADRA1DP25100 572 aa19.38■□□□□ 0.69
APP-215ENST00000474136 GRIA1P42261 906 aa19.38■□□□□ 0.69
APP-215ENST00000474136 SESN2P58004 480 aaPredicted RBP19.38■□□□□ 0.69
APP-215ENST00000474136 XIAPP98170 497 aa19.38■□□□□ 0.69
APP-215ENST00000474136 TLR1Q15399 786 aa19.38■□□□□ 0.69
APP-215ENST00000474136 FAM153CQ494X1 144 aa19.38■□□□□ 0.69
APP-215ENST00000474136 ZNF658BQ4V348 819 aaPredicted RBP19.38■□□□□ 0.69
APP-215ENST00000474136 PCID2Q5JVF3 399 aa19.38■□□□□ 0.69
APP-215ENST00000474136 ZBED8Q8IZ13 594 aa19.38■□□□□ 0.69
APP-215ENST00000474136 MREGQ8N565 214 aa19.38■□□□□ 0.69
APP-215ENST00000474136 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.38■□□□□ 0.697e-7■■■■■ 60.2
APP-215ENST00000474136 RELTQ969Z4 430 aa19.38■□□□□ 0.69
APP-215ENST00000474136 SIGLEC10Q96LC7 697 aa19.38■□□□□ 0.69
APP-215ENST00000474136 APOL2Q9BQE5 337 aa19.38■□□□□ 0.69
APP-215ENST00000474136 MVB12BQ9H7P6 319 aa19.38■□□□□ 0.69
APP-215ENST00000474136 OLAHQ9NV23 265 aa19.38■□□□□ 0.69
APP-215ENST00000474136 SPHK1Q9NYA1 384 aa19.38■□□□□ 0.69
APP-215ENST00000474136 CRLS1Q9UJA2 301 aa19.38■□□□□ 0.69
APP-215ENST00000474136 TEX264Q9Y6I9 313 aa19.38■□□□□ 0.69
APP-215ENST00000474136 ANKRD12Q6UB98 2062 aa19.38■□□□□ 0.69
APP-215ENST00000474136 AVILO75366 819 aa19.37■□□□□ 0.69
APP-215ENST00000474136 CRTAMO95727 393 aa19.37■□□□□ 0.69
APP-215ENST00000474136 BOP1Q14137 746 aaKnown RBP19.37■□□□□ 0.69
APP-215ENST00000474136 CASC4Q6P4E1 433 aa19.37■□□□□ 0.69
APP-215ENST00000474136 KIRREL2Q6UWL6 708 aa19.37■□□□□ 0.69
APP-215ENST00000474136 UNC5AQ6ZN44 842 aa19.37■□□□□ 0.69
APP-215ENST00000474136 LINC00696Q6ZRV3 163 aa19.37■□□□□ 0.69
APP-215ENST00000474136 PALM2Q8IXS6 379 aa19.37■□□□□ 0.69
APP-215ENST00000474136 GSPT2Q8IYD1 628 aaKnown RBP19.37■□□□□ 0.69
APP-215ENST00000474136 PPHLN1Q8NEY8 458 aaKnown RBP19.37■□□□□ 0.69
APP-215ENST00000474136 FLVCR1-AS1Q8TAF5 88 aa19.37■□□□□ 0.69
APP-215ENST00000474136 PEX13Q92968 403 aa19.37■□□□□ 0.69
APP-215ENST00000474136 EBNA1BP2Q99848 306 aaKnown RBP19.37■□□□□ 0.69
APP-215ENST00000474136 C19orf43Q9BQ61 176 aa19.37■□□□□ 0.69
APP-215ENST00000474136 EPS8L2Q9H6S3 715 aa19.37■□□□□ 0.69
APP-215ENST00000474136 MRM3Q9HC36 420 aaKnown RBP19.37■□□□□ 0.69
APP-215ENST00000474136 KLF2Q9Y5W3 355 aaPredicted RBP19.37■□□□□ 0.69
APP-215ENST00000474136 HS3ST3B1Q9Y662 390 aa19.37■□□□□ 0.69
APP-215ENST00000474136 MAD1L1Q9Y6D9 718 aa19.37■□□□□ 0.69
APP-215ENST00000474136 PCM1Q15154 2024 aa19.37■□□□□ 0.69
APP-215ENST00000474136 C17orf113A0A1B0GUU1 675 aa19.36■□□□□ 0.69
APP-215ENST00000474136 RALBP11234 206 aa19.36■□□□□ 0.69
APP-215ENST00000474136 ATP1B2P14415 290 aaPredicted RBP19.36■□□□□ 0.69
APP-215ENST00000474136 ALAS2P22557 587 aa19.36■□□□□ 0.69
APP-215ENST00000474136 MGAT1P26572 445 aa19.36■□□□□ 0.69
APP-215ENST00000474136 PHBP35232 272 aa19.36■□□□□ 0.69
APP-215ENST00000474136 Q0VFX4 171 aa19.36■□□□□ 0.69
APP-215ENST00000474136 IRAK1BP1Q5VVH5 260 aa19.36■□□□□ 0.69
APP-215ENST00000474136 TLDC1Q6P9B6 456 aa19.36■□□□□ 0.69
APP-215ENST00000474136 SHISA6Q6ZSJ9 500 aa19.36■□□□□ 0.69
APP-215ENST00000474136 DNAJC22Q8N4W6 341 aa19.36■□□□□ 0.69
APP-215ENST00000474136 BCORP1Q8N888 145 aa19.36■□□□□ 0.69
APP-215ENST00000474136 OR13C4Q8NGS5 318 aa19.36■□□□□ 0.69
APP-215ENST00000474136 TFGQ92734 400 aaPredicted RBP19.36■□□□□ 0.69
APP-215ENST00000474136 MESP1Q9BRJ9 268 aa19.36■□□□□ 0.69
APP-215ENST00000474136 NDC1Q9BTX1 674 aa19.36■□□□□ 0.69
APP-215ENST00000474136 TXLNGYQ9BZA5 131 aa19.36■□□□□ 0.69
APP-215ENST00000474136 LHPPQ9H008 270 aa19.36■□□□□ 0.69
APP-215ENST00000474136 ZC3H7BQ9UGR2 993 aaKnown RBP19.36■□□□□ 0.69
APP-215ENST00000474136 FAM237BA0A1B0GVD1 139 aa19.35■□□□□ 0.69
APP-215ENST00000474136 AGAP14A8MT82 685 aa19.35■□□□□ 0.69
APP-215ENST00000474136 CHRM5P08912 532 aaPredicted RBP19.35■□□□□ 0.69
APP-215ENST00000474136 PGAM1P18669 254 aa19.35■□□□□ 0.69
APP-215ENST00000474136 ELK3P41970 407 aa19.35■□□□□ 0.69
APP-215ENST00000474136 CD151P48509 253 aa19.35■□□□□ 0.69
APP-215ENST00000474136 TDGF1P3P51864 188 aa19.35■□□□□ 0.69
APP-215ENST00000474136 OLIG2Q13516 323 aa19.35■□□□□ 0.69
APP-215ENST00000474136 TAF1AQ15573 450 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms