RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SELENOSQ9BQE4 189 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 HAUS8Q9BT25 410 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 DPH7Q9BTV6 452 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 FUT8Q9BYC5 575 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 ACTR5Q9H9F9 607 aaPredicted RBP13.22□□□□□ -0.29
USF1-205ENST00000473969 GPN2Q9H9Y4 310 aaPredicted RBP13.22□□□□□ -0.29
USF1-205ENST00000473969 NMRAL1Q9HBL8 299 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 FAM60AQ9NP50 221 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 EURLQ9NYK6 297 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 ACOT9Q9Y305 439 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 OARD1Q9Y530 152 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 PCDHB3Q9Y5E6 796 aa13.22□□□□□ -0.29
USF1-205ENST00000473969 A0A087X1B8 175 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 EXOC1LA0A1B0GW35 172 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 SRPX2O60687 465 aaPredicted RBP13.21□□□□□ -0.29
USF1-205ENST00000473969 DLGAP3O95886 979 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 S100BP04271 92 aaPredicted RBP13.21□□□□□ -0.29
USF1-205ENST00000473969 ABHD2P08910 425 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 CNTFP26441 200 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 TYK2P29597 1187 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 HNMTP50135 292 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 SERPINB8P50452 374 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 TBPL1P62380 186 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 CXADRP78310 365 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 VAC14Q08AM6 782 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 BMPR2Q13873 1038 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 TSNQ15631 228 aaKnown RBP13.21□□□□□ -0.29
USF1-205ENST00000473969 ZKSCAN8Q15776 578 aaPredicted RBP13.21□□□□□ -0.29
USF1-205ENST00000473969 COL28A1Q2UY09 1125 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 TCTE1Q5JU00 501 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 FCRL6Q6DN72 434 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 MBOAT1Q6ZNC8 495 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 CMC1Q7Z7K0 106 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 VASH2Q86V25 355 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 C17orf64Q86WR6 236 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 CNPY4Q8N129 248 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 SPATA6LQ8N4H0 392 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 TTC29Q8NA56 475 aaPredicted RBP13.21□□□□□ -0.29
USF1-205ENST00000473969 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 FBXL8Q96CD0 374 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 RNF31Q96EP0 1072 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 PAFAH2Q99487 392 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 NDC1Q9BTX1 674 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 SPRY4Q9C004 299 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 TXLNGQ9NUQ3 528 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 SRPK3Q9UPE1 567 aa13.21□□□□□ -0.29
USF1-205ENST00000473969 MAP1BP46821 2468 aaKnown RBP13.21□□□□□ -0.29
USF1-205ENST00000473969 CHD6Q8TD26 2715 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 A0A0J9YVX5 310 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 ZSCAN9O15535 394 aaPredicted RBP13.2□□□□□ -0.3
USF1-205ENST00000473969 RIPK2O43353 540 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 ZNF749O43361 778 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 TIAF1O95411 115 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 LTA4HP09960 611 aaKnown RBP13.2□□□□□ -0.3
USF1-205ENST00000473969 FAM153BP0C7A2 387 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 CD1DP15813 335 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 AGXTP21549 392 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 TNFRSF8P28908 595 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 GRK3P35626 688 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 SLC26A3P40879 764 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 ARSFP54793 590 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 CDKL1Q00532 357 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 FAM83EQ2M2I3 478 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 FAM153CQ494X1 144 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 KLC3Q6P597 504 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 SBSNQ6UWP8 590 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 TIPARPQ7Z3E1 657 aaKnown RBP13.2□□□□□ -0.3
USF1-205ENST00000473969 GPSM1Q86YR5 675 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 ZNF655Q8N720 491 aaPredicted RBP13.2□□□□□ -0.3
USF1-205ENST00000473969 STAG3L4Q8TBR4 150 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 MR1Q95460 341 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 RERGQ96A58 199 aaPredicted RBP13.2□□□□□ -0.3
USF1-205ENST00000473969 TSNARE1Q96NA8 513 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 ZFYVE21Q9BQ24 234 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 UNKQ9C0B0 810 aaKnown RBP13.2□□□□□ -0.3
USF1-205ENST00000473969 SPRTNQ9H040 489 aaPredicted RBP13.2□□□□□ -0.3
USF1-205ENST00000473969 LHX9Q9NQ69 397 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 TMEM184CQ9NVA4 438 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 KCND3Q9UK17 655 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 DYRK1BQ9Y463 629 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 KLK4Q9Y5K2 254 aa13.2□□□□□ -0.3
USF1-205ENST00000473969 FRYQ5TBA9 3013 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 LOC101059948A0A1B0GTJ6 334 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 TEX51A0A1B0GUA7 166 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 OR2A25A4D2G3 310 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 NCF1BA6NI72 391 aaPredicted RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 NCF1CA8MVU1 366 aaPredicted RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 H7BY64 318 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 KATNA1O75449 491 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 EIF2S1P05198 315 aaKnown RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 NCF1P14598 390 aaPredicted RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 TCN2P20062 427 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 ALAS2P22557 587 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
USF1-205ENST00000473969 DLSTP36957 453 aa13.19□□□□□ -0.3
USF1-205ENST00000473969 STAT5AP42229 794 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms