RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RASAL1O95294 804 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 WDPCPO95876 746 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 HPP00738 406 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 ZGLP1P0C6A0 271 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 MYBL2P10244 700 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 PIM1P11309 404 aaPredicted RBP8.88□□□□□ -0.99
VCL-204ENST00000472585 PSMB5P28074 263 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 NSG1P42857 185 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 VSX2P58304 361 aaPredicted RBP8.88□□□□□ -0.99
VCL-204ENST00000472585 CSNK1G2P78368 415 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 PMP22Q01453 160 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 CACNG1Q06432 222 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 SEMA3AQ14563 771 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 RBBP7Q16576 425 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 CCDC38Q502W7 563 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 ODF2Q5BJF6 829 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 FBXO42Q6P3S6 717 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 NCCRP1Q6ZVX7 275 aaPredicted RBP8.88□□□□□ -0.99
VCL-204ENST00000472585 TAOK1Q7L7X3 1001 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 DNAJB8Q8NHS0 232 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 SUN3Q8TAQ9 357 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 DLG3Q92796 817 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 MAGED4Q96JG8 741 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 ZNF778Q96MU6 729 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 SPATA13Q96N96 652 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.88□□□□□ -0.99
VCL-204ENST00000472585 MRM3Q9HC36 420 aaKnown RBP8.88□□□□□ -0.99
VCL-204ENST00000472585 ABHD10Q9NUJ1 306 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 ABI3Q9P2A4 366 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 SLC2A6Q9UGQ3 507 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 INTS1Q8N201 2190 aaKnown RBP8.88□□□□□ -0.99
VCL-204ENST00000472585 FLNAP21333 2647 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 DNHD1Q96M86 4753 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 IGLV3-12A0A075B6K2 115 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 A0A1W2PPV9 198 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 A0A1W2PQ72 361 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 HYKKA2RU49 373 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 TMEM200CA6NKL6 621 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 GSTM1P09488 218 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 RBP3P10745 1247 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 ITGAMP11215 1152 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 ST13P50502 369 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 RAB28P51157 221 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 HADHBP55084 474 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 EIF3EP60228 445 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 GSTM4Q03013 218 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 GRM7Q14831 915 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 POU6F1Q14863 301 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 SF1Q15637 639 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 C3AR1Q16581 482 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 ITPRIPL1Q6GPH6 555 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 PACS1Q6VY07 963 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 ZNF534Q76KX8 674 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 NDUFAF7Q7L592 441 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 TGIF2LYQ8IUE0 185 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 KBTBD2Q8IY47 623 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 SLC22A15Q8IZD6 547 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 ARHGEF39Q8N4T4 335 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 OR13J1Q8NGT2 312 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 CFAP61Q8NHU2 1237 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 DENND1AQ8TEH3 1009 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 STYXQ8WUJ0 223 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 C10orf90Q96M02 699 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 CCDC42Q96M95 316 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 CRB3Q9BUF7 120 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 ENKD1Q9H0I2 346 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 VPS37BQ9H9H4 285 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 ZNF304Q9HCX3 659 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 LUC7LQ9NQ29 371 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 ZC3H7BQ9UGR2 993 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 C3orf18Q9UK00 162 aa8.87□□□□□ -0.99
VCL-204ENST00000472585 MRPS2Q9Y399 296 aaKnown RBP8.87□□□□□ -0.99
VCL-204ENST00000472585 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.87□□□□□ -0.991e-12■□□□□ 10.2
VCL-204ENST00000472585 IGHV1-45A0A0A0MS14 117 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 A0A0J9YVX5 310 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 USP1O94782 785 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 ACPPP15309 386 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 KLK2P20151 261 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 MSNP26038 577 aaKnown RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 GRIA1P42261 906 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 MMP16P51512 607 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 GDF10P55107 478 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 EEF1A2Q05639 463 aaKnown RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 HSPA14Q0VDF9 509 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 FASTKQ14296 549 aaKnown RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 PRPSAP1Q14558 356 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 ITIH4Q14624 930 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 PCOLCEQ15113 449 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 YOD1Q5VVQ6 348 aaPredicted RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 ZNF449Q6P9G9 518 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 DARS2Q6PI48 645 aaKnown RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 LDB1Q86U70 411 aaPredicted RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 TMEM200AQ86VY9 491 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 TMTC1Q8IUR5 882 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 KRT222Q8N1A0 295 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 TAB3Q8N5C8 712 aaPredicted RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 AMER3Q8N944 861 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 ACBD4Q8NC06 268 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 OR2A1Q8NGT9 310 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 OR2L8Q8NGY9 312 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms