RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PDLIM3Q53GG5 364 aaPredicted RBP4.7□□□□□ -1.66
SSB-209ENST00000470621 KRBOX4Q5JUW0 171 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 TTC30BQ8N4P2 665 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 MAPK1IP1LQ8NDC0 245 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 ROBO4Q8WZ75 1007 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 TAF15Q92804 592 aaKnown RBP eCLIP4.7□□□□□ -1.66
SSB-209ENST00000470621 ZNF486Q96H40 463 aaPredicted RBP4.7□□□□□ -1.66
SSB-209ENST00000470621 LINC00479Q96M42 142 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 ZNF558Q96NG5 402 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 NECTIN4Q96NY8 510 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 SYT15Q9BQS2 421 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 PRRG4Q9BZD6 226 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 CLIC5Q9NZA1 410 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 BCCIPQ9P287 314 aaKnown RBP eCLIP4.7□□□□□ -1.66
SSB-209ENST00000470621 R4GN57 208 aa4.7□□□□□ -1.66
SSB-209ENST00000470621 ARID2Q68CP9 1835 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 A0A1W2PR80 420 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 SNURFLB1AK76 121 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 CLDN4O14493 209 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 EXTL3O43909 919 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 TBX10O75333 385 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 CDK2AP2O75956 126 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 GSRP00390 522 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 EPCAMP16422 314 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 VAMP7P51809 220 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 PAX9P55771 341 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 DRP2Q13474 957 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 E2F5Q15329 346 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 SGSM1Q2NKQ1 1148 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 LCN1P1Q5VSP4 162 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 KRT74Q7RTS7 529 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 TLK2Q86UE8 772 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 LSMEM2Q8N112 164 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 GPRC5AQ8NFJ5 357 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 APOBEC4Q8WW27 367 aaKnown RBP4.69□□□□□ -1.66
SSB-209ENST00000470621 MRPS27Q92552 414 aaKnown RBP4.69□□□□□ -1.66
SSB-209ENST00000470621 SPSB1Q96BD6 273 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 ZNF689Q96CS4 500 aaPredicted RBP4.69□□□□□ -1.66
SSB-209ENST00000470621 HDAC11Q96DB2 347 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 C18orf12Q96KH6 178 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 C4orf45Q96LM5 186 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 SYT11Q9BT88 431 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 PPANQ9NQ55 473 aaKnown RBP4.69□□□□□ -1.66
SSB-209ENST00000470621 ZDHHC18Q9NUE0 388 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 PPP1R3CQ9UQK1 317 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 TTLL3Q9Y4R7 772 aa4.69□□□□□ -1.66
SSB-209ENST00000470621 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 ANTXRLA6NF34 631 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 EPHB6O15197 1021 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 SAGP10523 405 aaPredicted RBP4.68□□□□□ -1.66
SSB-209ENST00000470621 DPEP1P16444 411 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 CYP2A7P20853 494 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 MMP12P39900 470 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 LIMK1P53667 647 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 CSNK2BP67870 215 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 KLC1Q07866 573 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 CTU2Q2VPK5 515 aaKnown RBP4.68□□□□□ -1.66
SSB-209ENST00000470621 GPR33Q49SQ1 333 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 FIP1L1Q6UN15 594 aaKnown RBP4.68□□□□□ -1.66
SSB-209ENST00000470621 CCDC191Q8NCU4 936 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 VPS33AQ96AX1 596 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 RMDN1Q96DB5 314 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 MOCOSQ96EN8 888 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 CFAP57Q96MR6 1250 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 LRRC3BQ96PB8 259 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 SERINC2Q96SA4 455 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 CDK19Q9BWU1 502 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 ZMYND12Q9H0C1 365 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 ERAP1Q9NZ08 941 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 TBC1D7Q9P0N9 293 aa4.68□□□□□ -1.66
SSB-209ENST00000470621 A8MXE2 369 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 H7C423 109 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 PLOD3O60568 738 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 MAGEC1O60732 1142 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 ATP6AP2O75787 350 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 BAG3O95817 575 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 FYNP06241 537 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 ZSCAN5DPP0CG00 497 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 SLC2A2P11168 524 aaPredicted RBP4.67□□□□□ -1.66
SSB-209ENST00000470621 GSDMDP57764 484 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 RASGEF1BQ0VAM2 473 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 CAMK2DQ13557 499 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 ZNF772Q68DY9 489 aaPredicted RBP4.67□□□□□ -1.66
SSB-209ENST00000470621 OR4A47Q6IF82 309 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 KRT80Q6KB66 452 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 G2E3Q7L622 706 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 MAML2Q8IZL2 1156 aaPredicted RBP4.67□□□□□ -1.66
SSB-209ENST00000470621 CCDC89Q8N998 374 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 RASGEF1AQ8N9B8 481 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 GATAD1Q8WUU5 269 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 KCNE4Q8WWG9 221 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 ARHGAP45Q92619 1136 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 PROX1Q92786 737 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 IWS1Q96ST2 819 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 DGCR6LQ9BY27 220 aa4.67□□□□□ -1.66
SSB-209ENST00000470621 FZD8Q9H461 694 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms