RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ZNF662Q6ZS27 426 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 SHISA6Q6ZSJ9 500 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 RNF44Q7L0R7 432 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 CUZD1Q86UP6 607 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 METTL27Q8N6F8 245 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-208ENST00000470076 LHPPQ9H008 270 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 ZNF304Q9HCX3 659 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 AGPAT4Q9NRZ5 378 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 ZC3H7BQ9UGR2 993 aaKnown RBP16.71■□□□□ 0.27
COL7A1-208ENST00000470076 ITPR2Q14571 2701 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 HEATR5BQ9P2D3 2071 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 OR2A25A4D2G3 310 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 KRT87PA6NCN2 255 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 ANKUB1A6NFN9 424 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 WIPF3A6NGB9 483 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 PHF2O75151 1096 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 ALOX12BO75342 701 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 ERGP11308 486 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 OGNP20774 298 aaKnown RBP16.7■□□□□ 0.26
COL7A1-208ENST00000470076 KCNJ1P48048 391 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 SARNPP82979 210 aaKnown RBP16.7■□□□□ 0.26
COL7A1-208ENST00000470076 OCA2Q04671 838 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 MUM1Q2TAK8 710 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 ANKRD20A4Q4UJ75 823 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 HIST2H2BCQ6DN03 193 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 KIAA0930Q6ICG6 404 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-208ENST00000470076 OR11G2Q8NGC1 345 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 OR9A1PQ8NGU1 263 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 ZFYVE21Q9BQ24 234 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 DPH7Q9BTV6 452 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 CRB3Q9BUF7 120 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 ZNF282Q9UDV7 671 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-208ENST00000470076 ERRFI1Q9UJM3 462 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-208ENST00000470076 VPS9D1Q9Y2B5 631 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 CRYL1Q9Y2S2 319 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 MAU2Q9Y6X3 613 aa16.7■□□□□ 0.26
COL7A1-208ENST00000470076 LOC105369274A0A096LPK9 316 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 LOC102723532A0A0G2JNH3 316 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 GOLGA8KD6RF30 607 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 GOLGA8TH3BQL2 631 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 EIF2S1P05198 315 aaKnown RBP16.69■□□□□ 0.26
COL7A1-208ENST00000470076 CCDC175P0C221 793 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 ERVK-10P10266 1014 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 PAMP19021 973 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 CHRM3P20309 590 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 EMP3P54852 163 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 FASTKQ14296 549 aaKnown RBP16.69■□□□□ 0.26
COL7A1-208ENST00000470076 ARHGAP19Q14CB8 494 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 HIF1AQ16665 826 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 PARP9Q8IXQ6 854 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 OR4N4Q8N0Y3 316 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 TRIM58Q8NG06 486 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 STT3BQ8TCJ2 826 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 SMPDL3AQ92484 453 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 MIEF2Q96C03 454 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 ACAT2Q9BWD1 397 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 EPS8L2Q9H6S3 715 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 LZTFL1Q9NQ48 299 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 FAM114A2Q9NRY5 505 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 TSR3Q9UJK0 312 aaKnown RBP16.69■□□□□ 0.26
COL7A1-208ENST00000470076 NOVA2Q9UNW9 492 aaKnown RBP16.69■□□□□ 0.26
COL7A1-208ENST00000470076 SLC5A6Q9Y289 635 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 NTNG1Q9Y2I2 539 aa16.69■□□□□ 0.26
COL7A1-208ENST00000470076 CRYBG3Q68DQ2 2970 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 TCRBV7S3A2A0A539 114 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 A1L4Q6 167 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 ARHGEF33A8MVX0 844 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 E5RI56 91 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 MYO1CO00159 1063 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 CEP104O60308 925 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 NRP2O60462 931 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 VPS26AO75436 327 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 PSIP1O75475 530 aaKnown RBP16.68■□□□□ 0.26
COL7A1-208ENST00000470076 MED26O95402 600 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 LDLRP01130 860 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 ZGLP1P0C6A0 271 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 PKMP14618 531 aaKnown RBP16.68■□□□□ 0.26
COL7A1-208ENST00000470076 ACPPP15309 386 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 HSD17B2P37059 387 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 MAGEA6P43360 314 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 TSFMP43897 325 aaKnown RBP16.68■□□□□ 0.26
COL7A1-208ENST00000470076 KLC1Q07866 573 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 KCNJ11Q14654 390 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 PRTGQ2VWP7 1150 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.68■□□□□ 0.26
COL7A1-208ENST00000470076 FBXO42Q6P3S6 717 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 CILP2Q8IUL8 1156 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 DTWD1Q8N5C7 304 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 DNAJB14Q8TBM8 379 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 FAM136AQ96C01 138 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 MVB12AQ96EY5 273 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 THOC3Q96J01 351 aaKnown RBP16.68■□□□□ 0.26
COL7A1-208ENST00000470076 C5orf34Q96MH7 638 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 MRPS30Q9NP92 439 aaKnown RBP16.68■□□□□ 0.26
COL7A1-208ENST00000470076 CDC14AQ9UNH5 594 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 CSAG2Q9Y5P2 127 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 SVILO95425 2214 aa16.68■□□□□ 0.26
COL7A1-208ENST00000470076 CELSR2Q9HCU4 2923 aa16.67■□□□□ 0.26
COL7A1-208ENST00000470076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-208ENST00000470076 IGLV3-12A0A075B6K2 115 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms