RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SLC1A2P43004 574 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 VSX2P58304 361 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 RAPSNQ13702 412 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 ARHGAP19Q14CB8 494 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 PRR30Q53SZ7 412 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 WASHC2DQ5SRD0 308 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 ZNF549Q6P9A3 640 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 REXO1L1PQ8IX06 675 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 OR4N4Q8N0Y3 316 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 DTWD1Q8N5C7 304 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 EFCAB3Q8N7B9 438 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 FBXO15Q8NCQ5 510 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 ACTRT1Q8TDG2 376 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 COG1Q8WTW3 980 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 KCNJ9Q92806 393 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 SIGLEC10Q96LC7 697 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 NAP1L3Q99457 506 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 ZNF552Q9H707 407 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 FAM114A2Q9NRY5 505 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 NXT1Q9UKK6 140 aaKnown RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 IGKV1-8A0A0C4DH67 115 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 VSTM2BA6NLU5 285 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 E5RI56 91 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 MASP2O00187 686 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 SOCS6O14544 535 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 KIF5CO60282 957 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 CMPK1P30085 196 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 FNTAP49354 379 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 CTBP1Q13363 440 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 INPP5JQ15735 1006 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-208ENST00000469802 FAM214AQ32MH5 1076 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 LMNTD2Q8IXW0 634 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 SMPDL3AQ92484 453 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 C10orf90Q96M02 699 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 OSBPL9Q96SU4 736 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 PKP4Q99569 1192 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 ZFYVE21Q9BQ24 234 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 DPH7Q9BTV6 452 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 MFRPQ9BY79 579 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 SYNPO2LQ9H987 977 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 FBXO6Q9NRD1 293 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-208ENST00000469802 LUZP4Q9P127 313 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 HS3ST3B1Q9Y662 390 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 SPTBN1Q01082 2364 aaKnown RBP15.58■□□□□ 0.08
COL9A3-208ENST00000469802 CPAMD8Q8IZJ3 1885 aa15.58■□□□□ 0.08
COL9A3-208ENST00000469802 UTP20O75691 2785 aaKnown RBP15.57■□□□□ 0.08
COL9A3-208ENST00000469802 A0A0J9YVX5 310 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 HYKKA2RU49 373 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 VPS4BO75351 444 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 CATP04040 527 aaKnown RBP15.57■□□□□ 0.08
COL9A3-208ENST00000469802 ALPPP05187 535 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 GNLYP22749 145 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 OR1D4P47884 311 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 EMP3P54852 163 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 CUL1Q13616 776 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 THOC5Q13769 683 aaKnown RBP15.57■□□□□ 0.08
COL9A3-208ENST00000469802 LONRF1Q17RB8 773 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 PRTGQ2VWP7 1150 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 TTLL9Q3SXZ7 439 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 RNASEH2BQ5TBB1 312 aaKnown RBP15.57■□□□□ 0.08
COL9A3-208ENST00000469802 ZNF425Q6IV72 752 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 SUSD1Q6UWL2 747 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 PAQR7Q86WK9 346 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 SPNS2Q8IVW8 549 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 SLC35F6Q8N357 371 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 METTL27Q8N6F8 245 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-208ENST00000469802 CD200R1Q8TD46 325 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 ZNF480Q8WV37 535 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 ASB11Q8WXH4 323 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 PLCD4Q9BRC7 762 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 FBXL4Q9UKA2 621 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 VPS4AQ9UN37 437 aa15.57■□□□□ 0.08
COL9A3-208ENST00000469802 IGLV3-12A0A075B6K2 115 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 CTAGE9A4FU28 777 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 E7ENX8 843 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 GFYI3L273 518 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 CES2O00748 559 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 KLHL41O60662 606 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 IPO13O94829 963 aaKnown RBP15.56■□□□□ 0.08
COL9A3-208ENST00000469802 SLC16A8O95907 504 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 MPC1LP0DKB6 136 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 ENO3P13929 434 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-208ENST00000469802 HSD17B2P37059 387 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 SKIV2L2P42285 1042 aaKnown RBP15.56■□□□□ 0.08
COL9A3-208ENST00000469802 PNLIPRP1P54315 467 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 MPP1Q00013 466 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 TAP2Q03519 686 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 AIMP2Q13155 320 aaKnown RBP15.56■□□□□ 0.08
COL9A3-208ENST00000469802 ICE2Q659A1 982 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 PRMT9Q6P2P2 845 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 FBXO42Q6P3S6 717 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 KIRREL2Q6UWL6 708 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 PPIL6Q8IXY8 311 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 LRRC56Q8IYG6 542 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-208ENST00000469802 ARHGEF39Q8N4T4 335 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 GRK7Q8WTQ7 553 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 PSMG3-AS1Q96PY0 264 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 ACAT2Q9BWD1 397 aa15.56■□□□□ 0.08
COL9A3-208ENST00000469802 SOX17Q9H6I2 414 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms