RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PRAMEF13Q5VWM6 474 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 KIAA0930Q6ICG6 404 aaPredicted RBP23.39■■□□□ 1.33
PTCH1-210ENST00000468211 FBXO42Q6P3S6 717 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 Q6ZS92 163 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 CAND1Q86VP6 1230 aaKnown RBP23.39■■□□□ 1.33
PTCH1-210ENST00000468211 ZADH2Q8N4Q0 377 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 NACC2Q96BF6 587 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 FOPNLQ96NB1 174 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 ILKAPQ9H0C8 392 aaPredicted RBP23.39■■□□□ 1.33
PTCH1-210ENST00000468211 SPATA7Q9P0W8 599 aa23.39■■□□□ 1.33
PTCH1-210ENST00000468211 OR2A25A4D2G3 310 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 IPO13O94829 963 aaKnown RBP23.38■■□□□ 1.33
PTCH1-210ENST00000468211 ESR1P03372 595 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 EIF2S1P05198 315 aaKnown RBP23.38■■□□□ 1.33
PTCH1-210ENST00000468211 ERGP11308 486 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 VARSP26640 1264 aaKnown RBP23.38■■□□□ 1.33
PTCH1-210ENST00000468211 ATP5DP30049 168 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 ADARP55265 1226 aaKnown RBP23.38■■□□□ 1.33
PTCH1-210ENST00000468211 Q0VFX4 171 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 FAM214AQ32MH5 1076 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 TTC27Q6P3X3 843 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 SUSD1Q6UWL2 747 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 PARP9Q8IXQ6 854 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 RAB42Q8N4Z0 105 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 C10orf90Q96M02 699 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 TCF12Q99081 682 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 SLC30A3Q99726 388 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 DPH7Q9BTV6 452 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 PCDHGA10Q9Y5H3 936 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 MRFAP1Q9Y605 127 aa23.38■■□□□ 1.33
PTCH1-210ENST00000468211 KLHL41O60662 606 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 CHRM3P20309 590 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 MAGEA6P43360 314 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 GPS1Q13098 491 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 KLHL38Q2WGJ6 581 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 RNF187Q5TA31 235 aaPredicted RBP23.37■■□□□ 1.33
PTCH1-210ENST00000468211 CILP2Q8IUL8 1156 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 PRSS58Q8IYP2 241 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 OR11G2Q8NGC1 345 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 OR9A1PQ8NGU1 263 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 MAGEC3Q8TD91 643 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 ZNF304Q9HCX3 659 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 CUEDC1Q9NWM3 386 aaPredicted RBP23.37■■□□□ 1.33
PTCH1-210ENST00000468211 FAM169AQ9Y6X4 670 aa23.37■■□□□ 1.33
PTCH1-210ENST00000468211 DOPEY1Q5JWR5 2465 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.36■■□□□ 1.33
PTCH1-210ENST00000468211 IGKV1-8A0A0C4DH67 115 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 H3BMM5 538 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 PSIP1O75475 530 aaKnown RBP23.36■■□□□ 1.33
PTCH1-210ENST00000468211 PKMP14618 531 aaKnown RBP23.36■■□□□ 1.33
PTCH1-210ENST00000468211 OGNP20774 298 aaKnown RBP23.36■■□□□ 1.33
PTCH1-210ENST00000468211 KLC1Q07866 573 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 RBBP7Q16576 425 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 NEPROQ6NW34 567 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 TRIM58Q8NG06 486 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 GIMAP7Q8NHV1 300 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 STT3BQ8TCJ2 826 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 TM9SF4Q92544 642 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 PKP4Q99569 1192 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 BARD1Q99728 777 aaKnown RBP23.36■■□□□ 1.33
PTCH1-210ENST00000468211 ERRFI1Q9UJM3 462 aaPredicted RBP23.36■■□□□ 1.33
PTCH1-210ENST00000468211 NXT1Q9UKK6 140 aaKnown RBP23.36■■□□□ 1.33
PTCH1-210ENST00000468211 MED16Q9Y2X0 877 aa23.36■■□□□ 1.33
PTCH1-210ENST00000468211 A1L4Q6 167 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 H0YGG7 62 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 MYO1CO00159 1063 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 CMPK1P30085 196 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 GLRBP48167 497 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 CLCN7P51798 805 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 ARF3P61204 181 aaPredicted RBP23.35■■□□□ 1.33
PTCH1-210ENST00000468211 CCZ1BP86790 482 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 CCZ1P86791 482 aaPredicted RBP23.35■■□□□ 1.33
PTCH1-210ENST00000468211 PRTGQ2VWP7 1150 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 TUBB8Q3ZCM7 444 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 ANKRD20A4Q4UJ75 823 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 IGFL2Q6UWQ7 119 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 ZFYVE21Q9BQ24 234 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 CRB3Q9BUF7 120 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 SEMA3GQ9NS98 782 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 HOMER3Q9NSC5 361 aa23.35■■□□□ 1.33
PTCH1-210ENST00000468211 COPG1Q9Y678 874 aaKnown RBP23.35■■□□□ 1.33
PTCH1-210ENST00000468211 FFAR3O14843 346 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 GPR42O15529 346 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 KRT14P02533 472 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 ZGLP1P0C6A0 271 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 TSTA3Q13630 321 aaPredicted RBP23.34■■□□□ 1.33
PTCH1-210ENST00000468211 VWA2Q5GFL6 755 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 CASC4Q6P4E1 433 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 ZNF549Q6P9A3 640 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 LAPTM4BQ86VI4 370 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 PAQR7Q86WK9 346 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 DENND6AQ8IWF6 608 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 LRRC8AQ8IWT6 810 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 AGGF1Q8N302 714 aaeCLIP23.34■■□□□ 1.33
PTCH1-210ENST00000468211 PPFIBP2Q8ND30 876 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 SMPDL3AQ92484 453 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 ZNF669Q96BR6 464 aaPredicted RBP23.34■■□□□ 1.33
PTCH1-210ENST00000468211 C8orf44Q96CB5 159 aa23.34■■□□□ 1.33
PTCH1-210ENST00000468211 WDR77Q9BQA1 342 aaPredicted RBP23.34■■□□□ 1.33
PTCH1-210ENST00000468211 PLCD4Q9BRC7 762 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms