RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	CYP2A7	P20853	494 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	GLRB	P48167	497 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	ALDH18A1	P54886	795 aa	Known RBP	11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	CHI3L2	Q15782	390 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	ACSBG2	Q5FVE4	666 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	CYHR1	Q6ZMK1	362 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	TMEM26	Q6ZUK4	368 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	FRA10AC1	Q70Z53	315 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	DET1	Q7L5Y6	550 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	CPLX4	Q7Z7G2	160 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	AMZ2	Q86W34	360 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	GPSM1	Q86YR5	675 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	C10orf107	Q8IVU9	208 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	RBM12B	Q8IXT5	1001 aa	Known RBP	11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	SLC22A15	Q8IZD6	547 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	BMPER	Q8N8U9	685 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	PPP4R1	Q8TF05	950 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	TTC9	Q92623	222 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	PMEPA1	Q969W9	287 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	L3HYPDH	Q96EM0	354 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	HIST1H2AH	Q96KK5	128 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	SLC30A3	Q99726	388 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	HIST1H2AJ	Q99878	128 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	H2AFJ	Q9BTM1	129 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	TBC1D10A	Q9BXI6	508 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	C1QTNF3	Q9BXJ4	246 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	SLC12A9	Q9BXP2	914 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	PITPNM3	Q9BZ71	974 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	ASPSCR1	Q9BZE9	553 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	ALG9	Q9H6U8	611 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	MLXIPL	Q9NP71	852 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	POT1	Q9NUX5	634 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	OCIAD1	Q9NX40	245 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	STK38L	Q9Y2H1	464 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	OARD1	Q9Y530	152 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	PCDHB11	Q9Y5F2	797 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	AHCTF1	Q8WYP5	2266 aa		11.69	□□□□□ -0.54
CTNS-205	ENST00000467663	MN1	Q10571	1320 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	EFCAB7	A8K855	629 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	PDZK1P1	A8MUH7	402 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	STMND1	H3BQB6	276 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	GFY	I3L273	518 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	DLX3	O60479	287 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	SNN	O75324	88 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	POP7	O75817	140 aa	Known RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	C1QL1	O75973	258 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	MATN4	O95460	622 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	C9	P02748	559 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	CAT	P04040	527 aa	Known RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	RPN2	P04844	631 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	SBK3	P0C264	359 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	ANKRD34C	P0C6C1	535 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	RPL10	P27635	214 aa	Known RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	PPM1F	P49593	454 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	HNMT	P50135	292 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	CTSC	P53634	463 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	RAB15	P59190	212 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	MC2R	Q01718	297 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	HSPA14	Q0VDF9	509 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	BOP1	Q14137	746 aa	Known RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	TERF2	Q15554	542 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	ZNF658B	Q4V348	819 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	SULT1C3	Q6IMI6	304 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	PLXDC1	Q8IUK5	500 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	RASGRP3	Q8IV61	690 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	LKAAEAR1	Q8TD35	194 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	MCOLN3	Q8TDD5	553 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	ATL1	Q8WXF7	558 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	ASB11	Q8WXH4	323 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	PTER	Q96BW5	349 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	PLCD4	Q9BRC7	762 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	ZMYND15	Q9H091	742 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	COG4	Q9H9E3	785 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	PARVB	Q9HBI1	364 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	EML4	Q9HC35	981 aa	Known RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	SLC40A1	Q9NP59	571 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	SLC39A1	Q9NY26	324 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	CPSF2	Q9P2I0	782 aa	Known RBP	11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	GALP	Q9UBC7	116 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	CDYL	Q9Y232	598 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	WDR37	Q9Y2I8	494 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	B3GALT1	Q9Y5Z6	326 aa		11.68	□□□□□ -0.54
CTNS-205	ENST00000467663	WDR91	A4D1P6	747 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	OR52A4P	A6NMU1	304 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663		A8MT66	165 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663		A8MU76	341 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	SLCO1B7	G3V0H7	640 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	TOX3	O15405	576 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	EDF1	O60869	148 aa	Known RBP	11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	UBXN7	O94888	489 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	PRB1	P04280	392 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	ANXA5	P08758	320 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	TROVE2	P10155	538 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	MTHFD2	P13995	350 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	GFAP	P14136	432 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	ITGB6	P18564	788 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	BGN	P21810	368 aa		11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	MAP4	P27816	1152 aa	Known RBP	11.67	□□□□□ -0.54
CTNS-205	ENST00000467663	PIK3CG	P48736	1102 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms