RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZSCAN1Q8NBB4 408 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 SLC38A9Q8NBW4 561 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 OR2L3Q8NG85 312 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 OR2A1Q8NGT9 310 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 MCOLN3Q8TDD5 553 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 ZNF480Q8WV37 535 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 SMPDL3AQ92484 453 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 KIAA1143Q96AT1 154 aaPredicted RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 PDLIM5Q96HC4 596 aaKnown RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 SLC12A9Q9BXP2 914 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 CHRNA10Q9GZZ6 450 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 AKIRIN1Q9H9L7 192 aaPredicted RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 INTS7Q9NVH2 962 aaKnown RBP16.38■□□□□ 0.21
VPS52-215ENST00000464425 IRAK4Q9NWZ3 460 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 IL17BQ9UHF5 180 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 CROTQ9UKG9 612 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 PADI1Q9ULC6 663 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 PDE10AQ9Y233 779 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 PCDHGA4Q9Y5G9 962 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 ITPR1Q14643 2758 aa16.38■□□□□ 0.21
VPS52-215ENST00000464425 E7EQ34 232 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 ZNF749O43361 778 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 CPNE3O75131 537 aaKnown RBP16.37■□□□□ 0.21
VPS52-215ENST00000464425 OR2B3O76000 313 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 WISP3O95389 354 aaPredicted RBP16.37■□□□□ 0.21
VPS52-215ENST00000464425 MT-ND3P03897 115 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 SHBGP04278 402 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 CRABP2P29373 138 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 DLSTP36957 453 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 GABRA4P48169 554 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 RAB10P61026 200 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 CYP4F2P78329 520 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 MROH9Q5TGP6 573 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 FAM199XQ6PEV8 388 aaPredicted RBP16.37■□□□□ 0.21
VPS52-215ENST00000464425 MBOAT1Q6ZNC8 495 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 CCDC91Q7Z6B0 441 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 TDRPQ86YL5 185 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 MCATQ8IVS2 390 aaKnown RBP16.37■□□□□ 0.21
VPS52-215ENST00000464425 GPR135Q8IZ08 494 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 NKAPQ8N5F7 415 aaKnown RBP16.37■□□□□ 0.21
VPS52-215ENST00000464425 ANKRD7Q92527 254 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 MTBPQ96DY7 904 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 CLIP3Q96DZ5 547 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 SLC7A5P2Q9GIP4 190 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 ACTR5Q9H9F9 607 aaPredicted RBP16.37■□□□□ 0.21
VPS52-215ENST00000464425 PARVBQ9HBI1 364 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 LHX9Q9NQ69 397 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 PLCL2Q9UPR0 1127 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 PCDHB3Q9Y5E6 796 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 MGAQ8IWI9 3026 aa16.37■□□□□ 0.21
VPS52-215ENST00000464425 NBEAQ8NFP9 2946 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 CHD6Q8TD26 2715 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 ZNF839A8K0R7 811 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 E7ENX8 843 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 SLC16A5O15375 505 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 SNRPAP09012 282 aaKnown RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 ZNF37AP17032 561 aaPredicted RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 F8A1P23610 371 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 IMPA1P29218 277 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 CMPK1P30085 196 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 SLC26A3P40879 764 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 CSRP3P50461 194 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 TAP2Q03519 686 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 GPS2Q13227 327 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 SP140Q13342 867 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 PHKG1Q16816 387 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 BEND6Q5SZJ8 279 aaPredicted RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 SNRNP27Q8WVK2 155 aaKnown RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 MR1Q95460 341 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 ISL2Q96A47 359 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 ZUFSPQ96AP4 578 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 CCDC138Q96M89 665 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 ROPN1BQ9BZX4 212 aaPredicted RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 CAB39LQ9H9S4 337 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 ROPN1Q9HAT0 212 aaPredicted RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 GPAMQ9HCL2 828 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 EURLQ9NYK6 297 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 PSMC3IPQ9P2W1 217 aaPredicted RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 TAC3Q9UHF0 121 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 IKZF3Q9UKT9 509 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 MRPS18BQ9Y676 258 aaKnown RBP16.36■□□□□ 0.21
VPS52-215ENST00000464425 LOC400499M0QZD8 3231 aa16.36■□□□□ 0.21
VPS52-215ENST00000464425 NRP2O60462 931 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 KATNA1O75449 491 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 FKBP9O95302 570 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 HIST1H2AGP0C0S8 130 aaPredicted RBP16.35■□□□□ 0.21
VPS52-215ENST00000464425 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 TCN2P20062 427 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 HIST1H2ADP20671 130 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 SERPINB8P50452 374 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 THEMIS2Q5TEJ8 643 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 TIFABQ6ZNK6 161 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 LRRC56Q8IYG6 542 aaPredicted RBP16.35■□□□□ 0.21
VPS52-215ENST00000464425 IQCKQ8N0W5 287 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 ZNF655Q8N720 491 aaPredicted RBP16.35■□□□□ 0.21
VPS52-215ENST00000464425 CT55Q8WUE5 264 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 ALKBH8Q96BT7 664 aaKnown RBP16.35■□□□□ 0.21
VPS52-215ENST00000464425 HIST1H2AHQ96KK5 128 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 UBXN10Q96LJ8 280 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 HIST1H2AJQ99878 128 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms