RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ZNF552Q9H707 407 aaPredicted RBP19.65■□□□□ 0.74
PDLIM4-205ENST00000463615 USP9YO00507 2555 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 ZNF839A8K0R7 811 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 GFYI3L273 518 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 EIF3FO00303 357 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 IPO13O94829 963 aaKnown RBP19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 ALPPP05187 535 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 MPC1LP0DKB6 136 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 ENO3P13929 434 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 TERF1P54274 439 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 VSX2P58304 361 aaPredicted RBP19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 LONRF1Q17RB8 773 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 PRTGQ2VWP7 1150 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 FRMPD2BQ6IN97 320 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 FBXO42Q6P3S6 717 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 ZNF549Q6P9A3 640 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 TMEM151BQ8IW70 566 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 DENND6AQ8IWF6 608 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 PPIL6Q8IXY8 311 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 GIMAP7Q8NHV1 300 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 COG1Q8WTW3 980 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 ASB11Q8WXH4 323 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 FAM136AQ96C01 138 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 SLC30A3Q99726 388 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 DPH7Q9BTV6 452 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 ATP13A2Q9NQ11 1180 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 DHRS7Q9Y394 339 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 SHANK1Q9Y566 2161 aa19.64■□□□□ 0.73
PDLIM4-205ENST00000463615 NUP210LQ5VU65 1888 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 LOC105369274A0A096LPK9 316 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 LOC102723532A0A0G2JNH3 316 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 HYKKA2RU49 373 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 CTAGE9A4FU28 777 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 KIF5CO60282 957 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 VPS4BO75351 444 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 FOXL2P58012 376 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 PRDX1Q06830 199 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 AIMP2Q13155 320 aaKnown RBP19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 CTBP1Q13363 440 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 INPP5JQ15735 1006 aaPredicted RBP19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 ZNF425Q6IV72 752 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 CYHR1Q6ZMK1 362 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 OR4N4Q8N0Y3 316 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 PKP4Q99569 1192 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 PLCD4Q9BRC7 762 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 SLC6A20Q9NP91 592 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 SEMA3GQ9NS98 782 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 VPS4AQ9UN37 437 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 HS3ST3B1Q9Y662 390 aa19.63■□□□□ 0.73
PDLIM4-205ENST00000463615 IGLV3-12A0A075B6K2 115 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 IGKV1-8A0A0C4DH67 115 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 A0A0J9YVX5 310 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 GOLGA6L10A0A0M3HER8 536 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 E7ENX8 843 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 GOLGA8MH3BSY2 632 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 SOCS6O14544 535 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 ZSCAN12O43309 604 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 NRP2O60462 931 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 MED26O95402 600 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 SKIV2L2P42285 1042 aaKnown RBP19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 SLC1A2P43004 574 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 PNLIPRP1P54315 467 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 YBX1P67809 324 aaKnown RBP19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 TAP2Q03519 686 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 RNASEH2BQ5TBB1 312 aaKnown RBP19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 PAQR7Q86WK9 346 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 LRRC56Q8IYG6 542 aaPredicted RBP19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 SLC35F6Q8N357 371 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 ZNF480Q8WV37 535 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 INPP5DQ92835 1189 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 SLCO2A1Q92959 643 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 MVB12AQ96EY5 273 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 CCDC68Q9H2F9 335 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 MRPS30Q9NP92 439 aaKnown RBP19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 SLAMF7Q9NQ25 335 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 FBXO6Q9NRD1 293 aaPredicted RBP19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 FBXO5Q9UKT4 447 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 SNX12Q9UMY4 172 aa19.62■□□□□ 0.73
PDLIM4-205ENST00000463615 COL12A1Q99715 3063 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 CCNDBP1O95273 360 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 SLC16A8O95907 504 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 RPA3P35244 121 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 OR1D4P47884 311 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 ABATP80404 500 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 MUM1Q2TAK8 710 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 ICE2Q659A1 982 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 KIRREL2Q6UWL6 708 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 CD200R1Q8TD46 325 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 TM9SF4Q92544 642 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 VPS50Q96JG6 964 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 C10orf90Q96M02 699 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 FAM167BQ9BTA0 163 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 ZNF304Q9HCX3 659 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 C20orf96Q9NUD7 363 aaPredicted RBP19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 UTP6Q9NYH9 597 aaKnown RBP19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 CTSFQ9UBX1 484 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 ZC3H7BQ9UGR2 993 aaKnown RBP19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 FBXL4Q9UKA2 621 aa19.61■□□□□ 0.73
PDLIM4-205ENST00000463615 B3GNT3Q9Y2A9 372 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms