RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SLC5A2P31639 672 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 GRIA3P42263 894 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 CSRP3P50461 194 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 KIAA1614Q5VZ46 1190 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 SULT1C3Q6IMI6 304 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 C17orf64Q86WR6 236 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 GPR135Q8IZ08 494 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 CENPLQ8N0S6 344 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-204ENST00000463487 OR56A3Q8NH54 315 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 IGSF5Q9NSI5 407 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 WWOXQ9NZC7 414 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 NUDT4Q9NZJ9 180 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 IKZF3Q9UKT9 509 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 SNX7Q9UNH6 387 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 KLK4Q9Y5K2 254 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 B3GALT1Q9Y5Z6 326 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 NCF1BA6NI72 391 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-204ENST00000463487 NCF1CA8MVU1 366 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-204ENST00000463487 SUPT3HB4E1H0 165 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 STMND1H3BQB6 276 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 SUPT3HO75486 399 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 MT-ND3P03897 115 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 RBP1P09455 135 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 NCF1P14598 390 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-204ENST00000463487 SLCO1A2P46721 670 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 IRF9Q00978 393 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 OR4D1Q15615 310 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.04■□□□□ 0.64
COL9A3-204ENST00000463487 LCTLQ6UWM7 567 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 CDHR3Q6ZTQ4 885 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 ADCK2Q7Z695 626 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 ISCA2Q86U28 154 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 LRRC56Q8IYG6 542 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-204ENST00000463487 EXT2Q93063 718 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 PTERQ96BW5 349 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 CTRCQ99895 268 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 DPH7Q9BTV6 452 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 SGPP1Q9BX95 441 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 ROPN1BQ9BZX4 212 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-204ENST00000463487 ROPN1Q9HAT0 212 aaPredicted RBP19.04■□□□□ 0.64
COL9A3-204ENST00000463487 IRAK4Q9NWZ3 460 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 ACSL6Q9UKU0 697 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 PLCL2Q9UPR0 1127 aa19.04■□□□□ 0.64
COL9A3-204ENST00000463487 CCDC151A5D8V7 595 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 TMEM150CB9EJG8 249 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 C9orf172C9J069 976 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 GRK3P35626 688 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 GLRBP48167 497 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 ITGA1P56199 1179 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 DLG1Q12959 904 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 NAA30Q147X3 362 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-204ENST00000463487 GPR19Q15760 415 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 FAM20CQ8IXL6 584 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 PDPRQ8NCN5 879 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 ZNF248Q8NDW4 579 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 SNIP1Q8TAD8 396 aaKnown RBP19.03■□□□□ 0.64
COL9A3-204ENST00000463487 RHBDF1Q96CC6 855 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 ZNF501Q96CX3 271 aaPredicted RBP19.03■□□□□ 0.64
COL9A3-204ENST00000463487 SCYL1Q96KG9 808 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 ULBP3Q9BZM4 244 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 SLC7A5P2Q9GIP4 190 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 APMAPQ9HDC9 416 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 PCMTD2Q9NV79 361 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 TMCO1Q9UM00 188 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 DYRK1BQ9Y463 629 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 KCNE2Q9Y6J6 123 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 ANKRD12Q6UB98 2062 aa19.03■□□□□ 0.64
COL9A3-204ENST00000463487 PCM1Q15154 2024 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 TLDC2A0PJX2 215 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 RRP8O43159 456 aaKnown RBP19.02■□□□□ 0.64
COL9A3-204ENST00000463487 EZRP15311 586 aaKnown RBP19.02■□□□□ 0.64
COL9A3-204ENST00000463487 PTCHD3Q3KNS1 767 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 TMEM126BQ8IUX1 230 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 TBC1D19Q8N5T2 526 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 EPS8L3Q8TE67 593 aaKnown RBP19.02■□□□□ 0.64
COL9A3-204ENST00000463487 PYCR2Q96C36 320 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 PLCD4Q9BRC7 762 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 CAPS2Q9BXY5 557 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 RRAGDQ9NQL2 400 aaPredicted RBP19.02■□□□□ 0.64
COL9A3-204ENST00000463487 TMEM184CQ9NVA4 438 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 FOXJ2Q9P0K8 574 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 KLHL20Q9Y2M5 609 aa19.02■□□□□ 0.64
COL9A3-204ENST00000463487 ADAMTS20P59510 1910 aa19.02■□□□□ 0.63
COL9A3-204ENST00000463487 OR2A25A4D2G3 310 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.01■□□□□ 0.63
COL9A3-204ENST00000463487 E7EQ34 232 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 RFPL1O75677 317 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 OR2B3O76000 313 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 STK17BO94768 372 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 WDR47O94967 919 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 GFAPP14136 432 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 RELAQ04206 551 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 ZIC1Q15915 447 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 TCTE1Q5JU00 501 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 CROCCP2Q86T23 111 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 THOC6Q86W42 341 aaKnown RBP19.01■□□□□ 0.63
COL9A3-204ENST00000463487 DNAJC22Q8N4W6 341 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 ATOH8Q96SQ7 321 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 ZFYVE21Q9BQ24 234 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 FAM60AQ9NP50 221 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms