RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 VWA5B1Q5TIE3 1220 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 CASC4Q6P4E1 433 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF549Q6P9A3 640 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 CNSTQ6PJW8 725 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 CYHR1Q6ZMK1 362 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 COX15Q7KZN9 410 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 TAX1BP1Q86VP1 789 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 TMEM151BQ8IW70 566 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 DENND6AQ8IWF6 608 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 AGGF1Q8N302 714 aaeCLIP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 GALNT16Q8N428 558 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 FAM26EQ8N5C1 309 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 TTC29Q8NA56 475 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 Q8NA96 180 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 CLEC1AQ8NC01 280 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 CPT1CQ8TCG5 803 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 COG1Q8WTW3 980 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 ASB11Q8WXH4 323 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 SMPDL3AQ92484 453 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 KCNJ9Q92806 393 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 INPP5DQ92835 1189 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 PNPLA2Q96AD5 504 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 OSBPL9Q96SU4 736 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 SPSB2Q99619 263 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 MIPEPQ99797 713 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 TRIM56Q9BRZ2 755 aaKnown RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF552Q9H707 407 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 IRAK4Q9NWZ3 460 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 ANKMY1Q9P2S6 941 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 NXT1Q9UKK6 140 aaKnown RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 RUVBL2Q9Y230 463 aaKnown RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 DHRS7Q9Y394 339 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 FAM169AQ9Y6X4 670 aa8.76□□□□□ -1.01
BRCA1-207ENST00000461798 RP1L1Q8IWN7 2480 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-207ENST00000461798 PCSK5Q92824 1860 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 IGLV3-12A0A075B6K2 115 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 LOC105369274A0A096LPK9 316 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 LOC102723532A0A0G2JNH3 316 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 HYKKA2RU49 373 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 CTAGE9A4FU28 777 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF839A8K0R7 811 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 E5RI56 91 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 E7ENX8 843 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 AGPSO00116 658 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 EIF3FO00303 357 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 ZSCAN12O43309 604 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 IPO13O94829 963 aaKnown RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 CATP04040 527 aaKnown RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 MCM3P25205 808 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PSMB5P28074 263 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 CMPK1P30085 196 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 SKIV2L2P42285 1042 aaKnown RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 VSX2P58304 361 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 YBX1P67809 324 aaKnown RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 ABATP80404 500 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 TAP2Q03519 686 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PRDX1Q06830 199 aaKnown RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 CTBP1Q13363 440 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 INPP5JQ15735 1006 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 LONRF1Q17RB8 773 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PRTGQ2VWP7 1150 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 RNASEH2BQ5TBB1 312 aaKnown RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 SLC6A19Q695T7 634 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF470Q6ECI4 717 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 FRMPD2BQ6IN97 320 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF425Q6IV72 752 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PRMT9Q6P2P2 845 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 KIRREL2Q6UWL6 708 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PAQR7Q86WK9 346 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PPIL6Q8IXY8 311 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 LRRC56Q8IYG6 542 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 OR4N4Q8N0Y3 316 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 GIMAP7Q8NHV1 300 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 CALML6Q8TD86 181 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 GRK7Q8WTQ7 553 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 SLCO2A1Q92959 643 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF669Q96BR6 464 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PKP4Q99569 1192 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 SLC30A3Q99726 388 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 PLCD4Q9BRC7 762 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 DPH7Q9BTV6 452 aa8.75□□□□□ -1.01
BRCA1-207ENST00000461798 FER1L5A0AVI2 2057 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 IGKV1-8A0A0C4DH67 115 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 A0A0J9YVX5 310 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 GOLGA6L10A0A0M3HER8 536 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 KRT87PA6NCN2 255 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 H0YGG7 62 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 GOLGA8MH3BSY2 632 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SOCS6O14544 535 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 KIF5CO60282 957 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 VPS4BO75351 444 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 HAUS5O94927 633 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 CCNDBP1O95273 360 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 MED26O95402 600 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SLC16A8O95907 504 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ALPPP05187 535 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 RPA3P35244 121 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SLC1A2P43004 574 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms