RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 VSX2P58304 361 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 CTBP1Q13363 440 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 RAPSNQ13702 412 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 LONRF1Q17RB8 773 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 TTLL9Q3SXZ7 439 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 SLC6A19Q695T7 634 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 IGFL3Q6UXB1 125 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 PPIL6Q8IXY8 311 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 SLC35F6Q8N357 371 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 RBMXL3Q8N7X1 1067 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 Q8NA96 180 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 GALNT11Q8NCW6 608 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 SMPDL3AQ92484 453 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 PNPLA2Q96AD5 504 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 DPH7Q9BTV6 452 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 ACAT2Q9BWD1 397 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 SLC6A20Q9NP91 592 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 FBXO6Q9NRD1 293 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 ANKMY1Q9P2S6 941 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 NXT1Q9UKK6 140 aaKnown RBP11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 COMMD10Q9Y6G5 202 aa11.29□□□□□ -0.6
SOX2-OT-201ENST00000460739 DOCK10Q96BY6 2186 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 MAST4O15021 2626 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 DOPEY2Q9Y3R5 2298 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 LOC105369274A0A096LPK9 316 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 LOC102723532A0A0G2JNH3 316 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 A0A0J9YVX5 310 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 GOLGA6L10A0A0M3HER8 536 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 VSTM2BA6NLU5 285 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ZNF839A8K0R7 811 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 GFYI3L273 518 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 SOCS6O14544 535 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ZSCAN12O43309 604 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 VPS4BO75351 444 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 SLC16A8O95907 504 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ALPPP05187 535 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 F7P08709 466 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 MPC1LP0DKB6 136 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ENO3P13929 434 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 RPA3P35244 121 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 OR1D4P47884 311 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 PNLIPRP1P54315 467 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 EMP3P54852 163 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 RNASEH2BQ5TBB1 312 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 PRMT9Q6P2P2 845 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 FBXO42Q6P3S6 717 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 SUSD1Q6UWL2 747 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 PAQR7Q86WK9 346 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 OR4N4Q8N0Y3 316 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 FAM26EQ8N5C1 309 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 CALML6Q8TD86 181 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ASB11Q8WXH4 323 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 INPP5DQ92835 1189 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 PKP4Q99569 1192 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ZFYVE21Q9BQ24 234 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 PLCD4Q9BRC7 762 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 MFRPQ9BY79 579 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 CCDC68Q9H2F9 335 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ZNF552Q9H707 407 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ZNF304Q9HCX3 659 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 MRPS30Q9NP92 439 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 C20orf96Q9NUD7 363 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 CTSFQ9UBX1 484 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 ZC3H7BQ9UGR2 993 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 SNX12Q9UMY4 172 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 VPS4AQ9UN37 437 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 DHRS7Q9Y394 339 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 MAD1L1Q9Y6D9 718 aa11.28□□□□□ -0.6
SOX2-OT-201ENST00000460739 IGKV1-8A0A0C4DH67 115 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 CYSRT1A8MQ03 144 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 E7ENX8 843 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 MASP2O00187 686 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 EIF3FO00303 357 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 VPS26AO75436 327 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 IPO13O94829 963 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 HAUS5O94927 633 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 CCNDBP1O95273 360 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 MED26O95402 600 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 SKIV2L2P42285 1042 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 UQCRFS1P47985 274 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 TAP2Q03519 686 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 RELAQ04206 551 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 PRDX1Q06830 199 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 AIMP2Q13155 320 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 CUL1Q13616 776 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 MUM1Q2TAK8 710 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 PRTGQ2VWP7 1150 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 HSP90AA5PQ58FG0 334 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 ICE2Q659A1 982 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 ZNF425Q6IV72 752 aa11.27□□□□□ -0.61
SOX2-OT-201ENST00000460739 CYHR1Q6ZMK1 362 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms