RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 RECKO95980 971 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PAK4O96013 591 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 CCDC166P0CW27 439 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 STMN1P16949 149 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ITPKAP23677 461 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 EPHA8P29322 1005 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 CXCL12P48061 93 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 FNTBP49356 437 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 RPL14P50914 215 aaKnown RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 CEACAM7Q14002 265 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ANGPT1Q15389 498 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 SLC5A12Q1EHB4 618 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 POM121L1PQ3SYA9 428 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 GRHL2Q6ISB3 625 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 HMBOX1Q6NT76 420 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 LRRC70Q7Z2Q7 622 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ARHGAP22Q7Z5H3 698 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 NUDCD3Q8IVD9 361 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 MSRB3Q8IXL7 192 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ARMC10Q8N2F6 343 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PHC3Q8NDX5 983 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 OR52B6Q8NGF0 335 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 CHTF18Q8WVB6 975 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 OR2A5Q96R48 311 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 CENPHQ9H3R5 247 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PARVBQ9HBI1 364 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 RXFP3Q9NSD7 469 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ARMCX1Q9P291 453 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 CYP8B1Q9UNU6 501 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 SNX11Q9Y5W9 270 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 A0A0A6YYD5 115 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 A8MX80 341 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 LMO7DNF2Z398 122 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 FOXE1O00358 373 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 BTN3A1O00481 513 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 SCAMP1O15126 338 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 HDAC3O15379 428 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 STX7O15400 261 aaKnown RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 SH3BP5O60239 455 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 B4GALT2O60909 372 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 NDUFS2O75306 463 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ENTPD5O75356 428 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 C1QCP02747 245 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 ATP5F1P24539 256 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 CD1CP29017 333 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PREPP48147 710 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 HNMTP50135 292 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 NAA20P61599 178 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 MS4A2Q01362 244 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 USP39Q53GS9 565 aaKnown RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 FBXO42Q6P3S6 717 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 LRRTM4Q86VH4 590 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 OR5AR1Q8NGP9 310 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 FBLIM1Q8WUP2 373 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 LINGO1Q96FE5 620 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 TEX37Q96LM6 180 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 LRFN3Q9BTN0 628 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 TRMOQ9BU70 441 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PITHD1Q9GZP4 211 aaPredicted RBP4.78□□□□□ -1.64
RIF1-207ENST00000454583 OR2AG1Q9H205 316 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 KCMF1Q9P0J7 381 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 BTRCQ9Y297 605 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 PKP3Q9Y446 797 aa4.78□□□□□ -1.64
RIF1-207ENST00000454583 A0A1W2PQM1 296 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 CCDC78A2IDD5 438 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 UPK1AO00322 258 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 QSOX1O00391 747 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 RNASEH2AO75792 299 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 DNTTP04053 509 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 CKMT1AP12532 417 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PLAURQ03405 335 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PRTGQ2VWP7 1150 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 FHL5Q5TD97 284 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 HHATQ5VTY9 493 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 ICE2Q659A1 982 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 ANO7Q6IWH7 933 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 FBXL19Q6PCT2 694 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 DLEU7Q6UYE1 221 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 PDSS2Q86YH6 399 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 DPP10Q8N608 796 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 TEX9Q8N6V9 391 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 DNAAF3Q8N9W5 541 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 GOT1L1Q8NHS2 421 aaPredicted RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 CXorf40AQ8TE69 158 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 TSPEARQ8WU66 669 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 NSMCE1Q8WV22 266 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 RMDN1Q96DB5 314 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 THAP11Q96EK4 314 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 SLC41A2Q96JW4 573 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 SLC13A1Q9BZW2 595 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 WWP1Q9H0M0 922 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 RBM38Q9H0Z9 239 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 WDR26Q9H7D7 661 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 SPHK1Q9NYA1 384 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 NLGN3Q9NZ94 848 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 TSR3Q9UJK0 312 aaKnown RBP4.77□□□□□ -1.65
RIF1-207ENST00000454583 ACSL5Q9ULC5 683 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 NTNG1Q9Y2I2 539 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 IGLV3-12A0A075B6K2 115 aa4.77□□□□□ -1.65
RIF1-207ENST00000454583 C1orf226A1L170 272 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms