RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 KCNK6Q9Y257 313 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 FAM215AQ9Y5M1 114 aa4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 RAI1Q7Z5J4 1906 aaPredicted RBP4.97□□□□□ -1.61
SBDSP1-204ENST00000453858 DOCK4Q8N1I0 1966 aa4.96□□□□□ -1.61
SBDSP1-204ENST00000453858 TUBAL3A6NHL2 446 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 GOLGA8SH3BPF8 625 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 CES2O00748 559 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 TCF21O43680 179 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SNX2O60749 519 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 PRKD3O94806 890 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 PIGNO95427 931 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 HPP00738 406 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 VIPP01282 170 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SERPINA7P05543 415 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 ELFN1P0C7U0 828 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 MYBL2P10244 700 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SLC2A3P11169 496 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 MTHFD2P13995 350 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SLC2A4P14672 509 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 GAP43P17677 238 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 OR1E1P30953 314 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 CCR1P32246 355 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 RGS7P49802 495 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 IL13RA1P78552 427 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 DCDP81605 110 aaKnown RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 GNA12Q03113 381 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 DPTQ07507 201 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 ALCAMQ13740 583 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 POLD3Q15054 466 aaPredicted RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 ZNF124Q15973 351 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 MAN2A1Q16706 1144 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 CLEC12BQ2HXU8 276 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 TUBB8Q3ZCM7 444 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 NKAIN1Q4KMZ8 207 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 TMEM200BQ69YZ2 307 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 RHBDD2Q6NTF9 364 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 BRAT1Q6PJG6 821 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 DOK6Q6PKX4 331 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 LHFPL2Q6ZUX7 228 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 MARK2Q7KZI7 788 aaKnown RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 RUFY3Q7L099 469 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 DPPA4Q7L190 304 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 CHST15Q7LFX5 561 aaPredicted RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 TFAP2DQ7Z6R9 452 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SLC13A5Q86YT5 568 aaPredicted RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 GALNT13Q8IUC8 556 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 KBTBD2Q8IY47 623 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 LRRC56Q8IYG6 542 aaPredicted RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 AOPEPQ8N6M6 819 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SIRT6Q8N6T7 355 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 ECHDC3Q96DC8 303 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 AJUBAQ96IF1 538 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 CCL19Q99731 98 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SYT3Q9BQG1 590 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 ZSWIM1Q9BR11 485 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 ZNF747Q9BV97 191 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 TLR10Q9BXR5 811 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 PITHD1Q9GZP4 211 aaPredicted RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 POPDC2Q9HBU9 364 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 LUC7LQ9NQ29 371 aaKnown RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 AGPAT3Q9NRZ7 376 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 IFT80Q9P2H3 777 aaPredicted RBP4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 CDC23Q9UJX2 597 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SIK3Q9Y2K2 1263 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 VWA7Q9Y334 891 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 SNX10Q9Y5X0 201 aa4.96□□□□□ -1.62
SBDSP1-204ENST00000453858 A0A0A6YYJ9 748 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 A0A1W2PQ72 361 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 TMEM150CB9EJG8 249 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 TTI1O43156 1089 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 NRP2O60462 931 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 BMP10O95393 424 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 HLA-DRAP01903 254 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 CELA2AP08217 269 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 HBQ1P09105 142 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 SETSIPP0DME0 302 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 TMIGD3P0DMS9 266 aaPredicted RBP4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 CREB1P16220 341 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 CYP2A7P20853 494 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 FPR1P21462 350 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 FDXRP22570 491 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 XPAP23025 273 aaPredicted RBP4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 CYLC1P35663 651 aaPredicted RBP4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 ETV4P43268 484 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 CD83Q01151 205 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 COL10A1Q03692 680 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 KLF1Q13351 362 aaPredicted RBP4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 TOP3AQ13472 1001 aaPredicted RBP4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 VAX1Q5SQQ9 334 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 C1orf189Q5VU69 101 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 LCLAT1Q6UWP7 414 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 ABRAXAS1Q6UWZ7 409 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 LEKR1Q6ZMV7 388 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 RFLNAQ6ZTI6 216 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 EPM2AIP1Q7L775 607 aaPredicted RBP4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 TRIM74Q86UV6 250 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 CAMK1DQ8IU85 385 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 ELOA2Q8IYF1 753 aaPredicted RBP4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 CNTD1Q8N815 330 aa4.95□□□□□ -1.62
SBDSP1-204ENST00000453858 XXYLT1Q8NBI6 393 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms