RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 B3GALT5Q9Y2C3 310 aa3.99□□□□□ -1.77
VPS29-202ENST00000447578 RTL9Q8NET4 1388 aa3.99□□□□□ -1.77
VPS29-202ENST00000447578 COL16A1Q07092 1604 aaPredicted RBP3.99□□□□□ -1.77
VPS29-202ENST00000447578 ASTN2O75129 1339 aaPredicted RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 STK36Q9NRP7 1315 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 A0A087WV48 116 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 OOEPA6NGQ2 149 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 INAFM1C9JVW0 142 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 J3KR12 359 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 DYNC1I1O14576 645 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 WNT9BO14905 357 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 KCNN4O15554 427 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 HSPA12AO43301 675 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 LDB2O43679 373 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 RANBP6O60518 1105 aaKnown RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 SMC2O95347 1197 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 MOCS3O95396 460 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 HOXC6P09630 235 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 CMA1P23946 247 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 PTPN3P26045 913 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 APOBEC1P41238 236 aaKnown RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 MTHFRP42898 656 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 SYKP43405 635 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 GYG1P46976 350 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 PCYT1AP49585 367 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 NAGLUP54802 743 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 SELENOVP59797 346 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 TPM4P67936 248 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 CDK3Q00526 305 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 SLC39A14Q15043 492 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 DECR1Q16698 335 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 KRTCAP3Q53RY4 240 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 CAVIN4Q5BKX8 364 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 DCAF12L2Q5VW00 463 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 SHEQ5VZ18 495 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 FRG2Q64ET8 278 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 LCN10Q6JVE6 187 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 KCTD18Q6PI47 426 aaPredicted RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 PARM1Q6UWI2 310 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 Q6ZTK2 550 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 SMIM5Q71RC9 77 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 ZNF534Q76KX8 674 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 ZNF367Q7RTV3 350 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 ABI3BPQ7Z7G0 1075 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 TIGD4Q8IY51 512 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 UTP15Q8TED0 518 aaKnown RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 SDR42E1Q8WUS8 393 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 ZFAND2BQ8WV99 257 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 SLAMF9Q96A28 289 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 TBC1D31Q96DN5 1066 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 PRMT6Q96LA8 375 aaPredicted RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 AK8Q96MA6 479 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 LRFN5Q96NI6 719 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 LRRC3BQ96PB8 259 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 OR6C1Q96RD1 312 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 UBAC1Q9BSL1 405 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 MOV10L1Q9BXT6 1211 aaKnown RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 FZD8Q9H461 694 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 RNF41Q9H4P4 317 aaPredicted RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 MID1IP1Q9NPA3 183 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 VPS18Q9P253 973 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 CACNG4Q9UBN1 327 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 LEF1Q9UJU2 399 aaPredicted RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 ODF2LQ9ULJ1 636 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 KCNJ14Q9UNX9 436 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 PTGDR2Q9Y5Y4 395 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 AHDC1Q5TGY3 1603 aaPredicted RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.98□□□□□ -1.77
VPS29-202ENST00000447578 NWD2Q9ULI1 1742 aa3.98□□□□□ -1.77
VPS29-202ENST00000447578 MROH7-TTC4A0A0A0MT08 1334 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 ATXN2Q99700 1313 aaKnown RBP3.97□□□□□ -1.77
VPS29-202ENST00000447578 PLCH1Q4KWH8 1693 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 ROBO1Q9Y6N7 1651 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 COL22A1Q8NFW1 1626 aaPredicted RBP3.97□□□□□ -1.77
VPS29-202ENST00000447578 A0A1W2PRV1 198 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 ANKUB1A6NFN9 424 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 C19orf81C9J6K1 198 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 FAM86B1E9PN63 330 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 MS4A18H0YCH9 400 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 MEIS2O14770 477 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 ANKRD28O15084 1053 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 XRCC3O43542 346 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 SLC22A3O75751 556 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 TOMM70O94826 608 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 ZNF432O94892 652 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 FAM86B2P0C5J1 330 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 DANCRP0C864 163 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 ADRA2CP18825 462 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 UGT1A1P22309 533 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 GNLYP22749 145 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 AZGP1P25311 298 aaKnown RBP3.97□□□□□ -1.77
VPS29-202ENST00000447578 SOAT1P35610 550 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 PDLIM4P50479 330 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 RASSF2P50749 326 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 GAS1P54826 345 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 HNRNPH2P55795 449 aaKnown RBP3.97□□□□□ -1.77
VPS29-202ENST00000447578 BPIFB3P59826 476 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 CD81P60033 236 aa3.97□□□□□ -1.77
VPS29-202ENST00000447578 DYNLL1P63167 89 aaKnown RBP3.97□□□□□ -1.77
VPS29-202ENST00000447578 AKAP17AQ02040 695 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms