RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 IGKV1-8A0A0C4DH67 115 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 A0A0J9YVX5 310 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF839A8K0R7 811 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF891A8MT65 544 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-204ENST00000446876 MEN1O00255 615 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 ZSCAN9O15535 394 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-204ENST00000446876 PHGDHO43175 533 aaKnown RBP14.23□□□□□ -0.13
HDAC4-204ENST00000446876 FKBP9O95302 570 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 STX2P32856 288 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 GMPRP36959 345 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 HSD17B2P37059 387 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 GP5P40197 560 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 TBPL1P62380 186 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 RHDQ02161 417 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 SOWAHCQ53LP3 525 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-204ENST00000446876 THEMIS2Q5TEJ8 643 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 FAM69BQ5VUD6 431 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 ICE2Q659A1 982 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 FRMPD2BQ6IN97 320 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 CEP112Q8N8E3 955 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 EXTL1Q92935 676 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 ALKBH8Q96BT7 664 aaKnown RBP14.23□□□□□ -0.13
HDAC4-204ENST00000446876 ATG10Q9H0Y0 220 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 SYNPO2LQ9H987 977 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 CUEDC1Q9NWM3 386 aaPredicted RBP14.23□□□□□ -0.13
HDAC4-204ENST00000446876 DHCR7Q9UBM7 475 aaKnown RBP14.23□□□□□ -0.13
HDAC4-204ENST00000446876 SH2B3Q9UQQ2 575 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 SEC16AO15027 2179 aa14.23□□□□□ -0.13
HDAC4-204ENST00000446876 LOC105369274A0A096LPK9 316 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 LOC102723532A0A0G2JNH3 316 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 OR2A25A4D2G3 310 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 TARM1B6A8C7 271 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 CDC7O00311 574 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 SLC16A5O15375 505 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 GUCA1CO95843 209 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 KLK3P07288 261 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 VSX2P58304 361 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 NFKB2Q00653 900 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 CDC20Q12834 499 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 USP10Q14694 798 aaKnown RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 SLC9A5Q14940 896 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 ZXDCQ2QGD7 858 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 GLE1Q53GS7 698 aaKnown RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 TAF1BQ53T94 588 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF385CQ66K41 422 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 AGTRAPQ6RW13 159 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 FAM198BQ6UWH4 519 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 SBSNQ6UWP8 590 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF517Q6ZMY9 492 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 CYS1Q717R9 158 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 RNF44Q7L0R7 432 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 OR4N4Q8N0Y3 316 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 SPATA6LQ8N4H0 392 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 DTWD1Q8N5C7 304 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 ZUFSPQ96AP4 578 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 MRRFQ96E11 262 aaKnown RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 MED8Q96G25 268 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 CCDC138Q96M89 665 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 LRFN5Q96NI6 719 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 GPR22Q99680 433 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 SELENOSQ9BQE4 189 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 EFHD1Q9BUP0 239 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 CDC42EP4Q9H3Q1 356 aaKnown RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 ACTL8Q9H568 366 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 GPAMQ9HCL2 828 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 CCDC177Q9NQR7 707 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 UTP6Q9NYH9 597 aaKnown RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 MTRF1LQ9UGC7 380 aaKnown RBP14.22□□□□□ -0.13
HDAC4-204ENST00000446876 KLK4Q9Y5K2 254 aa14.22□□□□□ -0.13
HDAC4-204ENST00000446876 CACNA1GO43497 2377 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 ERVH48-1M5A8F1 160 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 WISP3O95389 354 aaPredicted RBP14.21□□□□□ -0.13
HDAC4-204ENST00000446876 FURINP09958 794 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 RHOXF2BP0C7M4 288 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 SLC12A2P55011 1212 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 POU4F1Q01851 419 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 PRDX1Q06830 199 aaKnown RBP14.21□□□□□ -0.13
HDAC4-204ENST00000446876 NAE1Q13564 534 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 ERV3-1Q14264 604 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 SLMAPQ14BN4 828 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 TBR1Q16650 682 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 LINC00303Q3SY05 128 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 ZC3H12BQ5HYM0 836 aaKnown RBP14.21□□□□□ -0.13
HDAC4-204ENST00000446876 PRAMEF13Q5VWM6 474 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF425Q6IV72 752 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 TLDC1Q6P9B6 456 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 ADCK2Q7Z695 626 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 PAQR7Q86WK9 346 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 PLD3Q8IV08 490 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 NKAPQ8N5F7 415 aaKnown RBP14.21□□□□□ -0.13
HDAC4-204ENST00000446876 ENDOVQ8N8Q3 282 aaKnown RBP14.21□□□□□ -0.13
HDAC4-204ENST00000446876 PYCR2Q96C36 320 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 PDLIM5Q96HC4 596 aaKnown RBP14.21□□□□□ -0.13
HDAC4-204ENST00000446876 FMO2Q99518 471 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 RHOXF2Q9BQY4 288 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 PLCD4Q9BRC7 762 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 ARL15Q9NXU5 204 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 AP1M2Q9Y6Q5 423 aa14.21□□□□□ -0.13
HDAC4-204ENST00000446876 C21orf140B9A014 251 aa14.2□□□□□ -0.14
HDAC4-204ENST00000446876 HAT1O14929 419 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms