RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TWF2Q6IBS0 349 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 RGMBQ6NW40 437 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 C17orf99Q6UX52 265 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 C9orf47Q6ZRZ4 202 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 RINLQ6ZS11 566 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PIGZQ86VD9 579 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM228AQ86W67 206 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC26A11Q86WA9 606 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 OR4N4Q8N0Y3 316 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 C4orf33Q8N1A6 199 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 VPS52Q8N1B4 723 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SIX6OS1Q8N1H7 587 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TMEM86AQ8N2M4 240 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 METTL25Q8N6Q8 603 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC185Q8N715 623 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 BANPQ8N9N5 519 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC63Q8NA47 563 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CCDC110Q8TBZ0 833 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC2A12Q8TD20 617 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TCP10LQ8TDR4 215 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC8CQ8TDW0 803 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CLEC4CQ8WTT0 213 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC22A17Q8WUG5 538 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 DCAKDQ8WVC6 231 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TFB1MQ8WVM0 346 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HMGB4Q8WW32 186 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC44A1Q8WWI5 657 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HTR3CQ8WXA8 447 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZNF75CPQ92670 426 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 APBB2Q92870 758 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 LRRC39Q96DD0 335 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CFAP36Q96G28 342 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 P2RY11Q96G91 374 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SENP8Q96LD8 212 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 QKIQ96PU8 341 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 CSPG4P5Q96PW8 444 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PPP1R10Q96QC0 940 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 FCRL5Q96RD9 977 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAFAH2Q99487 392 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 FERMT1Q9BQL6 677 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 WDR83Q9BRX9 315 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HERC2P3Q9BVR0 1158 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PHF7Q9BWX1 381 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 PITPNM3Q9BZ71 974 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 GHITMQ9H3K2 345 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 KIF9Q9HAQ2 790 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 IL21RQ9HBE5 538 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 XAB2Q9HCS7 855 aaKnown RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC40A1Q9NP59 571 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 KRT84Q9NSB2 600 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 ETNK2Q9NVF9 386 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 MTMR10Q9NXD2 777 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 NKIRAS2Q9NYR9 191 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 RCOR3Q9P2K3 495 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TBC1D29Q9UFV1 150 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 FZD10Q9ULW2 581 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 STAP1Q9ULZ2 295 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC12A4Q9UP95 1085 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 HEMK1Q9Y5R4 338 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRPV2Q9Y5S1 764 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 TEX264Q9Y6I9 313 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 WDR81Q562E7 1941 aa3.42□□□□□ -1.86
HMGB3P11-201ENST00000440127 SYNJ2BP-COX16A0A087WUM0 186 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SAC3D1A6NKF1 404 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SDR42E2A6NKP2 422 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRIM49D1C9J1S8 452 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 M0QYT0 321 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 EEF2KO00418 725 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CLDN5O00501 218 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 COPEO14579 308 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PTGESO14684 152 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 CAPN9O14815 690 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 PRAMEF2O60811 474 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 EDF1O60869 148 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 DUSP11O75319 330 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 AVILO75366 819 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 TIPRLO75663 272 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 DCTN3O75935 186 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ATP5HO75947 161 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 BEST1O76090 585 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 METTL18O95568 372 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SCGB1D1O95968 90 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 APOEP02649 317 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 APRTP07741 180 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SNRPAP09012 282 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM200BP0CF97 657 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 NEFHP12036 1026 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MLNP12872 115 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 NQO1P15559 274 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 GOT1P17174 413 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 ACAT1P24752 427 aaKnown RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC8A1P32418 973 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 GSTM5P46439 218 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 HCAR3P49019 387 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 GLUD2P49448 558 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 SERPINB9P50453 376 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 AIF1P55008 147 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 MAP3K7CLP57077 242 aa3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM3BP58499 235 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P11-201ENST00000440127 DAOAP59103 153 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms