RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 REPS1Q96D71 796 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 C11orf24Q96F05 449 aaPredicted RBP11.4□□□□□ -0.59
SMAD3-202ENST00000439724 NECTIN4Q96NY8 510 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 TSSK3Q96PN8 268 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 OR52E6Q96RD3 313 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 EFCAB11Q9BUY7 163 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 LGR4Q9BXB1 951 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 C1QTNF2Q9BXJ5 285 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 KCNH6Q9H252 994 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 SGK2Q9HBY8 427 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 MBNL1Q9NR56 388 aaKnown RBP11.4□□□□□ -0.59
SMAD3-202ENST00000439724 CLDND1Q9NY35 253 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 VAPAQ9P0L0 249 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 VPS29Q9UBQ0 182 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 MAGEL2Q9UJ55 1249 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 PPT2Q9UMR5 302 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 ZFR2Q9UPR6 939 aaKnown RBP11.4□□□□□ -0.59
SMAD3-202ENST00000439724 RUVBL1Q9Y265 456 aaKnown RBP11.4□□□□□ -0.59
SMAD3-202ENST00000439724 DYRK1BQ9Y463 629 aa11.4□□□□□ -0.59
SMAD3-202ENST00000439724 A0A096LPI6 279 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 KANSL1LA0AUZ9 987 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 H0YJX3 145 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 KMOO15229 486 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 HNRNPRO43390 633 aaKnown RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 PLRG1O43660 514 aaKnown RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 DFNA5O60443 496 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 ERN1O75460 977 aaKnown RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 UMPSP11172 480 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 ERGP11308 486 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 NPPBP16860 134 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 PRPS1L1P21108 318 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 KELP23276 732 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 PSMA4P25789 261 aaKnown RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 S100A3P33764 101 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 LTBRP36941 435 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 OR4D2P58180 307 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 MTPNP58546 118 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 RPS21P63220 83 aaKnown RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 PHC1P78364 1004 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 MTAPQ13126 283 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 FGL2Q14314 439 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 RUNDC3AQ59EK9 446 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 TMEM196Q5HYL7 178 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 METRNLQ641Q3 311 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 ATG9BQ674R7 924 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 KIAA1211LQ6NV74 962 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 TMPRSS11BQ86T26 416 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 IFNEQ86WN2 208 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 MSRB3Q8IXL7 192 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 LAS2Q8IYD9 372 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 OR7G3Q8NG95 312 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 SETD7Q8WTS6 366 aaKnown RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 GATA6Q92908 595 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 CCDC115Q96NT0 180 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 SH3GL1Q99961 368 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 VCXQ9H320 206 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 WDR26Q9H7D7 661 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 RMND5AQ9H871 391 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 SERHLQ9NQF3 203 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 CCDC177Q9NQR7 707 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 PHPT1Q9NRX4 125 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-202ENST00000439724 SLC23A2Q9UGH3 650 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 PRKAB1Q9Y478 270 aa11.39□□□□□ -0.59
SMAD3-202ENST00000439724 PCM1Q15154 2024 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 MAGEA13PA6NCF6 341 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 MAGEB17A8MXT2 336 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 PI15O43692 258 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 MYO1DO94832 1006 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 RPN2P04844 631 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 C1GALT1C1LP0DN25 315 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 C7P10643 843 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 MTHFD1P11586 935 aaKnown RBP11.38□□□□□ -0.59
SMAD3-202ENST00000439724 MYCLP1P12525 358 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-202ENST00000439724 HOXB9P17482 250 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-202ENST00000439724 IL10P22301 178 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 HRH2P25021 359 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 BMP8BP34820 402 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 HSPA13P48723 471 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 CYP4F3Q08477 520 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 ACSM2AQ08AH3 577 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 DMPKQ09013 629 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 LAPTM5Q13571 262 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 COL19A1Q14993 1142 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 ARHGAP19Q14CB8 494 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 TMEM259Q4ZIN3 620 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 PAGE2BQ5JRK9 111 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 ACSM2BQ68CK6 577 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 SDE2Q6IQ49 451 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 HMBOX1Q6NT76 420 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 LCTLQ6UWM7 567 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 SYT12Q8IV01 421 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 RNF175Q8N4F7 328 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 ANKFN1Q8N957 763 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 PAPD5Q8NDF8 572 aaKnown RBP11.38□□□□□ -0.59
SMAD3-202ENST00000439724 TNIP2Q8NFZ5 429 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 SLC5A11Q8WWX8 675 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 STARD8Q92502 1023 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 ITCHQ96J02 903 aa11.38□□□□□ -0.59
SMAD3-202ENST00000439724 MTERF1Q99551 399 aaKnown RBP11.38□□□□□ -0.59
SMAD3-202ENST00000439724 OSBPL6Q9BZF3 934 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms