RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SLC26A1Q9H2B4 701 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 ZNF304Q9HCX3 659 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 MRPS30Q9NP92 439 aaKnown RBP17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 UTP6Q9NYH9 597 aaKnown RBP17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 CTSFQ9UBX1 484 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 FBXL4Q9UKA2 621 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 KLK4Q9Y5K2 254 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 MAD1L1Q9Y6D9 718 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 MAU2Q9Y6X3 613 aa17.65■□□□□ 0.42
AC004540.1-201ENST00000439120 A0A1W2PPV9 198 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 BLACEA4D250 179 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 ARHGEF33A8MVX0 844 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 MASP2O00187 686 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 GP1BBP13224 206 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 HSD17B2P37059 387 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 OCA2Q04671 838 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 MUM1Q2TAK8 710 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 PRAMEF13Q5VWM6 474 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 PRMT9Q6P2P2 845 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 SUSD1Q6UWL2 747 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 COX15Q7KZN9 410 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 RNF44Q7L0R7 432 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 RASGEF1CQ8N431 466 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 MCUQ8NE86 351 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 CABS1Q96KC9 395 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 SPSB2Q99619 263 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 TRIM56Q9BRZ2 755 aaKnown RBP17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 ZNF552Q9H707 407 aaPredicted RBP17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 SLC6A20Q9NP91 592 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 SEMA3GQ9NS98 782 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 GALPQ9UBC7 116 aa17.64■□□□□ 0.41
AC004540.1-201ENST00000439120 ANKRD12Q6UB98 2062 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 MYO1CO00159 1063 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 PGRMC1O00264 195 aaKnown RBP17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 PHF2O75151 1096 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 PSIP1O75475 530 aaKnown RBP17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 CCNDBP1O95273 360 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 SYF2O95926 243 aaKnown RBP17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 ONECUT2O95948 504 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 COILP38432 576 aaPredicted RBP17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 SOX8P57073 446 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 ARHGAP19Q14CB8 494 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 TUBB8Q3ZCM7 444 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 PLEKHN1Q494U1 663 aaPredicted RBP17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 IGFL3Q6UXB1 125 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 TMEM151BQ8IW70 566 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 CALML6Q8TD86 181 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 GRK7Q8WTQ7 553 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 SERPINB12Q96P63 405 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 CRB3Q9BUF7 120 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 FBXO6Q9NRD1 293 aaPredicted RBP17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 ENAMQ9NRM1 1142 aa17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 C20orf96Q9NUD7 363 aaPredicted RBP17.63■□□□□ 0.41
AC004540.1-201ENST00000439120 PCM1Q15154 2024 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 LOC105369274A0A096LPK9 316 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 LOC102723532A0A0G2JNH3 316 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 GOLGA6L10A0A0M3HER8 536 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 OR2A25A4D2G3 310 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 TCP11X1B4DZS4 312 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 NRP2O60462 931 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 ALOX12BO75342 701 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 FBLP22087 321 aaKnown RBP17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 CARSP49589 748 aaKnown RBP17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 CLCN7P51798 805 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 PNLIPRP1P54315 467 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 CTBP1Q13363 440 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 CUL1Q13616 776 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 LONRF1Q17RB8 773 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 NEK10Q6ZWH5 1172 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 ADCK2Q7Z695 626 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 DENND6AQ8IWF6 608 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 REXO1L1PQ8IX06 675 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 LMNTD2Q8IXW0 634 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 OR4N4Q8N0Y3 316 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 KCNJ9Q92806 393 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 RERGQ96A58 199 aaPredicted RBP17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 MIEF2Q96C03 454 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 PKP4Q99569 1192 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 ABCF3Q9NUQ8 709 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 ZNF282Q9UDV7 671 aaPredicted RBP17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 TAC3Q9UHF0 121 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 CDC14AQ9UNH5 594 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 HS3ST3B1Q9Y662 390 aa17.62■□□□□ 0.41
AC004540.1-201ENST00000439120 SOCS6O14544 535 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 PRPF4O43172 522 aaKnown RBP eCLIP17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 KIF5CO60282 957 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 ERGP11308 486 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 ENO3P13929 434 aaPredicted RBP17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 SLC1A2P43004 574 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 CYP1B1Q16678 543 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 THEMIS2Q5TEJ8 643 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 AGAP7PQ5VUJ5 663 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 PARP9Q8IXQ6 854 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 PRSS58Q8IYP2 241 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 DTWD1Q8N5C7 304 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 CISD2Q8N5K1 135 aaKnown RBP17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 STT3BQ8TCJ2 826 aa17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 SNRNP40Q96DI7 357 aaKnown RBP17.61■□□□□ 0.41
AC004540.1-201ENST00000439120 AGAP4Q96P64 663 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms