RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 UGT3A2Q3SY77 523 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 CBWD6Q4V339 395 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 CBWD3Q5JTY5 395 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 SUSD1Q6UWL2 747 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 LMNTD2Q8IXW0 634 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 ZNF595Q8IYB9 648 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 THAP8Q8NA92 274 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 PTERQ96BW5 349 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 TMCO6Q96DC7 493 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 MTMR12Q9C0I1 747 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 THAP2Q9H0W7 228 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 MED20Q9H944 212 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.82□□□□□ -1.965e-7■□□□□ 10.8
CLK1-204ENST00000432425 MAN1B1Q9UKM7 699 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 ABT1Q9ULW3 272 aaKnown RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 TMED3Q9Y3Q3 217 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 CSAG2Q9Y5P2 127 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 ABCA7Q8IZY2 2146 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 ZNF318Q5VUA4 2279 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 GLOD5A6NK44 160 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 SOCS3O14543 225 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 FIBPO43427 364 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 TOMM70O94826 608 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 FAM200BP0CF97 657 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 PRKAR1AP10644 381 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 PFKFB1P16118 471 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 PORP16435 677 aaPredicted RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 HLA-FP30511 346 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 TSFMP43897 325 aaKnown RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 LMAN1P49257 510 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 TMEM50BP56557 158 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 KLC1Q07866 573 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 STK4Q13043 487 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 NFATC2Q13469 925 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 UGT3A1Q6NUS8 523 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 MFSD12Q6NUT3 480 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 GPRIN3Q6ZVF9 776 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 SH2D6Q7Z4S9 175 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 CDC20BQ86Y33 519 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 DNAAF5Q86Y56 855 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 TSPAN14Q8NG11 270 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 OR2L2Q8NH16 312 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 GATAD1Q8WUU5 269 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 RSPH1Q8WYR4 309 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 NXNL1Q96CM4 212 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 PANK3Q9H999 370 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 CCDC177Q9NQR7 707 aaPredicted RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 CPSF2Q9P2I0 782 aaKnown RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 DDX25Q9UHL0 483 aaKnown RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 MUTYHQ9UIF7 546 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 FBXO2Q9UK22 296 aaPredicted RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 NOL7Q9UMY1 257 aaKnown RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 PCDHGB4Q9UN71 923 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 GPR34Q9UPC5 381 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 CSNK1G3Q9Y6M4 447 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 A0A1W2PR80 420 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 A0A1W2PRQ8 180 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 NEMP2A6NFY4 417 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 ARPC2O15144 300 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 TRUB2O95900 331 aaKnown RBP2.81□□□□□ -1.96
CLK1-204ENST00000432425 IGHEP01854 428 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 CALCOCO2Q13137 446 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 RIGQ13278 110 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 ZNF74Q16587 644 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 MOGAT2Q3SYC2 334 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 SPECC1Q5M775 1068 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 KIF6Q6ZMV9 814 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 ERC1Q8IUD2 1116 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 MMD2Q8IY49 270 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 LGI2Q8N0V4 545 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 OR8H2Q8N162 312 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 OTUD6BQ8N6M0 293 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 Q8NBF4 154 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 PRSS33Q8NF86 280 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 NUP37Q8NFH4 326 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 APOBEC4Q8WW27 367 aaKnown RBP2.81□□□□□ -1.96
CLK1-204ENST00000432425 ATL1Q8WXF7 558 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 NYXQ9GZU5 481 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 PDE7BQ9NP56 450 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 GDE1Q9NZC3 331 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 CRNNQ9UBG3 495 aaPredicted RBP2.81□□□□□ -1.96
CLK1-204ENST00000432425 CHORDC1Q9UHD1 332 aaPredicted RBP2.81□□□□□ -1.96
CLK1-204ENST00000432425 SLC24A2Q9UI40 661 aa2.81□□□□□ -1.96
CLK1-204ENST00000432425 ISY1Q9ULR0 285 aaKnown RBP2.81□□□□□ -1.96
CLK1-204ENST00000432425 IGHV3OR16-10A0A075B7F0 116 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 MPTX1A8MV57 137 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 IGHV2-70P01814 119 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 IGHDP01880 384 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 LINGO3P0C6S8 592 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 MAPK12P53778 367 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 EFTUD2Q15029 972 aaKnown RBP eCLIP2.8□□□□□ -1.964e-8■■■■□ 23.4
CLK1-204ENST00000432425 ZNF774Q6NX45 483 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 MZT2BQ6NZ67 158 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 ZNF343Q6P1L6 599 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 NOTUMQ6P988 496 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 NUP54Q7Z3B4 507 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 ANKRD23Q86SG2 305 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 ZSCAN30Q86W11 494 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 NKAIN3Q8N8D7 197 aa2.8□□□□□ -1.96
CLK1-204ENST00000432425 SLC37A3Q8NCC5 494 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms