RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 SEMA4BQ9NPR2 832 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-206ENST00000428313 MCUBQ9NWR8 336 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 TNFSF13BQ9Y275 285 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 KLF2Q9Y5W3 355 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-206ENST00000428313 TSC2P49815 1807 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 IGKV6D-21A0A0A0MT36 114 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 RPS10-NUDT3A0A1W2PQS6 291 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FAM25EA8MYX2 175 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FAM72CH0Y354 149 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FZD6O60353 706 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 SLC43A1O75387 559 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 HLA-DQB1P01920 261 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 DGKQP52824 942 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 CLDN20P56880 219 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 CAMK2GQ13555 558 aaPredicted RBP15.66■□□□□ 0.1
C9orf3-206ENST00000428313 VEPH1Q14D04 833 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 LAPTM4AQ15012 233 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 RUNDC3AQ59EK9 446 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FAM72AQ5TYM5 149 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FAM72DQ6L9T8 149 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 MZT2BQ6NZ67 158 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FAM124AQ86V42 546 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FAM72BQ86X60 149 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 CALHM3Q86XJ0 350 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 GHDCQ8N2G8 530 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 PGBD5Q8N414 524 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 RNF149Q8NC42 400 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 OR7G3Q8NG95 312 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 NETO1Q8TDF5 533 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 GPR152Q8TDT2 470 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FAM151AQ8WW52 585 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 PDXPQ96GD0 296 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 OPALINQ96PE5 141 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 TMEM168Q9H0V1 697 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 FZD8Q9H461 694 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 IKZF5Q9H5V7 419 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 POPDC3Q9HBV1 291 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 C1orf109Q9NX04 203 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 PTTG3PQ9NZH4 202 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 IKZF3Q9UKT9 509 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 SAMD4AQ9UPU9 718 aaKnown RBP15.66■□□□□ 0.1
C9orf3-206ENST00000428313 MAN2B2Q9Y2E5 1009 aa15.66■□□□□ 0.1
C9orf3-206ENST00000428313 MYO1GB0I1T2 1018 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 SMLR1H3BR10 107 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 HCN1O60741 890 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 GPX5O75715 221 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 OR4F21O95013 312 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 MLYCDO95822 493 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 WDPCPO95876 746 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 STSP08842 583 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 FOSL1P15407 271 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 HTR7P34969 479 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 ADRA1BP35368 520 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 GGT2P36268 569 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 RPS19P39019 145 aaKnown RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 BAATQ14032 418 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 LARS2Q15031 903 aaKnown RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PTCHD3Q3KNS1 767 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 INO80DQ53TQ3 878 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 OR4F3Q6IEY1 312 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PHC2Q8IXK0 858 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PLPP6Q8IY26 295 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 ATG16L2Q8NAA4 619 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 LPCAT1Q8NF37 534 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 OR52H1Q8NGJ2 320 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 UFD1Q92890 307 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 ZSWIM3Q96MP5 696 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 TAPBPLQ9BX59 468 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 RBFOX1Q9NWB1 397 aaKnown RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 ABCG2Q9UNQ0 655 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 DOCK1Q14185 1865 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 KERAO60938 352 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 RAD17O75943 681 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 CNPP09543 421 aaKnown RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 HSMCR30P0CW71 290 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 HOXB3P14651 431 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 ZP3P21754 424 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PTX3P26022 381 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 AKT1P31749 480 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 TMEM132DQ14C87 1099 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 TSTQ16762 297 aaKnown RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 DCAF15Q66K64 600 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PIM3Q86V86 326 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 MSRB3Q8IXL7 192 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 RBFAQ8N0V3 343 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PGBD3Q8N328 593 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 FBXO39Q8N4B4 442 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 CAMKK1Q8N5S9 505 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PTP4A1Q93096 173 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 MRGPRX2Q96LB1 330 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 CAMKK2Q96RR4 588 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 MRPL45Q9BRJ2 306 aaKnown RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 TTPALQ9BTX7 342 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 RACGAP1Q9H0H5 632 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 FAM105AQ9NUU6 356 aa15.65■□□□□ 0.1
C9orf3-206ENST00000428313 PRMT7Q9NVM4 692 aaPredicted RBP15.65■□□□□ 0.1
C9orf3-206ENST00000428313 ZNF236Q9UL36 1845 aa15.64■□□□□ 0.09
C9orf3-206ENST00000428313 ASB14A6NK59 587 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms