RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 PRDX1Q06830 199 aaKnown RBP17.71■□□□□ 0.43
MSH5-207ENST00000425703 CKAP4Q07065 602 aaKnown RBP17.71■□□□□ 0.43
MSH5-207ENST00000425703 GRM7Q14831 915 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 FASTKD3Q14CZ7 662 aaKnown RBP17.71■□□□□ 0.43
MSH5-207ENST00000425703 PAQR3Q6TCH7 311 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 CYS1Q717R9 158 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 RNF44Q7L0R7 432 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 APLFQ8IW19 511 aaPredicted RBP17.71■□□□□ 0.43
MSH5-207ENST00000425703 PALM2Q8IXS6 379 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 LRRC56Q8IYG6 542 aaPredicted RBP17.71■□□□□ 0.43
MSH5-207ENST00000425703 MYO1HQ8N1T3 1032 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 CCDC138Q96M89 665 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 SELENOSQ9BQE4 189 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 DPH5Q9H2P9 285 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 MRPS30Q9NP92 439 aaKnown RBP17.71■□□□□ 0.43
MSH5-207ENST00000425703 UTP6Q9NYH9 597 aaKnown RBP17.71■□□□□ 0.43
MSH5-207ENST00000425703 GRHL1Q9NZI5 618 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 CDC23Q9UJX2 597 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 SNX7Q9UNH6 387 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 PADI2Q9Y2J8 665 aa17.71■□□□□ 0.43
MSH5-207ENST00000425703 FDXRP22570 491 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 PMS2P54278 862 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 IL2P60568 153 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 RPS18P62269 152 aaKnown RBP17.7■□□□□ 0.42
MSH5-207ENST00000425703 MRPS25P82663 173 aaKnown RBP17.7■□□□□ 0.42
MSH5-207ENST00000425703 PDAP1Q13442 181 aaKnown RBP17.7■□□□□ 0.42
MSH5-207ENST00000425703 COL9A2Q14055 689 aaPredicted RBP17.7■□□□□ 0.42
MSH5-207ENST00000425703 HECTD2Q5U5R9 776 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 ICE2Q659A1 982 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 SUSD1Q6UWL2 747 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 GPATCH11Q8N954 259 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 ADAMTS17Q8TE56 1095 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 PDLIM5Q96HC4 596 aaKnown RBP17.7■□□□□ 0.42
MSH5-207ENST00000425703 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 DPH7Q9BTV6 452 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 ACAT2Q9BWD1 397 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 PARVBQ9HBI1 364 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 SLC17A6Q9P2U8 582 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 DHCR7Q9UBM7 475 aaKnown RBP17.7■□□□□ 0.42
MSH5-207ENST00000425703 MAN2B2Q9Y2E5 1009 aa17.7■□□□□ 0.42
MSH5-207ENST00000425703 A0A1B0GX78 115 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 TSPAN12O95859 305 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 SYF2O95926 243 aaKnown RBP17.69■□□□□ 0.42
MSH5-207ENST00000425703 IMPA1P29218 277 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 IL10RAQ13651 578 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 FAM214AQ32MH5 1076 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 NKAIN1Q4KMZ8 207 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 ZNF605Q86T29 641 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 ZC3HC1Q86WB0 502 aaKnown RBP17.69■□□□□ 0.42
MSH5-207ENST00000425703 TTC29Q8NA56 475 aaPredicted RBP17.69■□□□□ 0.42
MSH5-207ENST00000425703 LINGO1Q96FE5 620 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 ZFYVE21Q9BQ24 234 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 PCBD2Q9H0N5 130 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 SLC6A20Q9NP91 592 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 TAC3Q9UHF0 121 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 PDE10AQ9Y233 779 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 PSAT1Q9Y617 370 aa17.69■□□□□ 0.42
MSH5-207ENST00000425703 SNRNP200O75643 2136 aaKnown RBP17.69■□□□□ 0.42
MSH5-207ENST00000425703 DSCR3O14972 297 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 KLF7O75840 302 aaPredicted RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 TUBB4AP04350 444 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 GSTA2P09210 222 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 PIM1P11309 404 aaPredicted RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 EZRP15311 586 aaKnown RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 HRH2P25021 359 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 EMP3P54852 163 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 C1orf189Q5VU69 101 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 ZNF425Q6IV72 752 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 FBXO42Q6P3S6 717 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 STRA8Q7Z7C7 330 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 PAQR7Q86WK9 346 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 C9orf43Q8TAL5 461 aaPredicted RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 ANKRD7Q92527 254 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 FKBP10Q96AY3 582 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 C16orf45Q96MC5 204 aaPredicted RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 IP6K3Q96PC2 410 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 MCMBPQ9BTE3 642 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 SAYSD1Q9NPB0 183 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 CUTCQ9NTM9 273 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 STOX2Q9P2F5 926 aaPredicted RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 IFT80Q9P2H3 777 aaPredicted RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 GPN3Q9UHW5 284 aaPredicted RBP17.68■□□□□ 0.42
MSH5-207ENST00000425703 ADAMTS6Q9UKP5 1117 aa17.68■□□□□ 0.42
MSH5-207ENST00000425703 BOD1L1Q8NFC6 3051 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 IGKV1-8A0A0C4DH67 115 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 A0A0J9YVX5 310 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 RFPL1O75677 317 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 ALBP02768 609 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 ENO2P09104 434 aaPredicted RBP17.67■□□□□ 0.42
MSH5-207ENST00000425703 HIST1H2AGP0C0S8 130 aaPredicted RBP17.67■□□□□ 0.42
MSH5-207ENST00000425703 HIST1H2ADP20671 130 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 CCND1P24385 295 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 AP1S2P56377 157 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 VSX2P58304 361 aaPredicted RBP17.67■□□□□ 0.42
MSH5-207ENST00000425703 YBX1P67809 324 aaKnown RBP17.67■□□□□ 0.42
MSH5-207ENST00000425703 NFKB2Q00653 900 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 NFATC3Q12968 1075 aa17.67■□□□□ 0.42
MSH5-207ENST00000425703 TSTA3Q13630 321 aaPredicted RBP17.67■□□□□ 0.42
MSH5-207ENST00000425703 WHAMMP3Q1A5X7 153 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms