RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZNF839A8K0R7 811 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 PSIP1O75475 530 aaKnown RBP24.23■■□□□ 1.47
VEGFA-208ENST00000417285 TCP1P17987 556 aaKnown RBP24.23■■□□□ 1.47
VEGFA-208ENST00000417285 MCM3P25205 808 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 AIMP2Q13155 320 aaKnown RBP24.23■■□□□ 1.47
VEGFA-208ENST00000417285 LONRF1Q17RB8 773 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 ACSBG2Q5FVE4 666 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 CALML6Q8TD86 181 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 C20orf96Q9NUD7 363 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-208ENST00000417285 CDC23Q9UJX2 597 aa24.23■■□□□ 1.47
VEGFA-208ENST00000417285 SNRNP200O75643 2136 aaKnown RBP24.23■■□□□ 1.47
VEGFA-208ENST00000417285 MYO1CO00159 1063 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 CATP04040 527 aaKnown RBP24.22■■□□□ 1.47
VEGFA-208ENST00000417285 ERGP11308 486 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 PSMB5P28074 263 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 KLHL38Q2WGJ6 581 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 PRMT9Q6P2P2 845 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 FBXO42Q6P3S6 717 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 DENND6AQ8IWF6 608 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 Q8NA96 180 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 ANP32BQ92688 251 aaKnown RBP24.22■■□□□ 1.47
VEGFA-208ENST00000417285 SIGLEC10Q96LC7 697 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 ZNF552Q9H707 407 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-208ENST00000417285 FBXO6Q9NRD1 293 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-208ENST00000417285 UTP6Q9NYH9 597 aaKnown RBP24.22■■□□□ 1.47
VEGFA-208ENST00000417285 GALPQ9UBC7 116 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 ZC3H7BQ9UGR2 993 aaKnown RBP24.22■■□□□ 1.47
VEGFA-208ENST00000417285 ASIC3Q9UHC3 531 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 B3GNT3Q9Y2A9 372 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 FER1L5A0AVI2 2057 aa24.22■■□□□ 1.47
VEGFA-208ENST00000417285 A0A0J9YVX5 310 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 OR2A25A4D2G3 310 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 ARHGEF33A8MVX0 844 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 GNLYP22749 145 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 RPA3P35244 121 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-208ENST00000417285 CLCN7P51798 805 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 EMP3P54852 163 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 CTBP1Q13363 440 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 FASTKQ14296 549 aaKnown RBP24.21■■□□□ 1.47
VEGFA-208ENST00000417285 RNASEH2BQ5TBB1 312 aaKnown RBP24.21■■□□□ 1.47
VEGFA-208ENST00000417285 FHL5Q5TD97 284 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 PCGF5Q86SE9 256 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 ZADH2Q8N4Q0 377 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 SPSB2Q99619 263 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 ZFYVE21Q9BQ24 234 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 DPH7Q9BTV6 452 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 SLC29A3Q9BZD2 475 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 ZNF304Q9HCX3 659 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 SEMA3GQ9NS98 782 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 COMMD10Q9Y6G5 202 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 ANKRD12Q6UB98 2062 aa24.21■■□□□ 1.47
VEGFA-208ENST00000417285 VSTM2BA6NLU5 285 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 SLC1A2P43004 574 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 OR1D4P47884 311 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 FOXL2P58012 376 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 MUM1Q2TAK8 710 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 PLEKHN1Q494U1 663 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-208ENST00000417285 FRMPD2BQ6IN97 320 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 COX15Q7KZN9 410 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 RNF44Q7L0R7 432 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 AGGF1Q8N302 714 aaeCLIP24.2■■□□□ 1.46
VEGFA-208ENST00000417285 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.2■■□□□ 1.466e-6■■■■■ 47.7
VEGFA-208ENST00000417285 FBXO15Q8NCQ5 510 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-208ENST00000417285 KCNJ9Q92806 393 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 DDX47Q9H0S4 455 aaKnown RBP24.2■■□□□ 1.46
VEGFA-208ENST00000417285 MRPS30Q9NP92 439 aaKnown RBP24.2■■□□□ 1.46
VEGFA-208ENST00000417285 FBXL4Q9UKA2 621 aa24.2■■□□□ 1.46
VEGFA-208ENST00000417285 LOC105369274A0A096LPK9 316 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 LOC102723532A0A0G2JNH3 316 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 KRT87PA6NCN2 255 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 DNALI1O14645 258 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 VPS26AO75436 327 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 CCNDBP1O95273 360 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 EIF2S1P05198 315 aaKnown RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 ERVK-10P10266 1014 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 GP1BBP13224 206 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 ENO3P13929 434 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 UQCRFS1P47985 274 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 CARSP49589 748 aaKnown RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 RELAQ04206 551 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 OCA2Q04671 838 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 PRDX1Q06830 199 aaKnown RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 PTK6Q13882 451 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 PRAMEF13Q5VWM6 474 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 IQCKQ8N0W5 287 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 OR4N4Q8N0Y3 316 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 GABPB2Q8TAK5 448 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.19■■□□□ 1.46
VEGFA-208ENST00000417285 ASB11Q8WXH4 323 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 INPP5DQ92835 1189 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 SLCO2A1Q92959 643 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 PSMG3-AS1Q96PY0 264 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 PKP4Q99569 1192 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 PLCD4Q9BRC7 762 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 FAM167BQ9BTA0 163 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 ACAT2Q9BWD1 397 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 PCYOX1Q9UHG3 505 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 CDC14AQ9UNH5 594 aa24.19■■□□□ 1.46
VEGFA-208ENST00000417285 DHRS7Q9Y394 339 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms