RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 C3orf30Q96M34 536 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 RHCGQ9UBD6 479 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CEPT1Q9Y6K0 416 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 LOC730098B7Z3J9 87 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 H3BMQ9 156 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 AGXTP21549 392 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 TGFBR2P37173 567 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ASMTP46597 345 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 OR1E2P47887 323 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 LYPLAL1Q5VWZ2 237 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CERS6Q6ZMG9 384 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF248Q8NDW4 579 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 NTAN1Q96AB6 310 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 COG8Q96MW5 612 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CCDC115Q96NT0 180 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 POLR2J3Q9H1A7 115 aaKnown RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 MUC13Q9H3R2 512 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 SLAMF8Q9P0V8 285 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 EIF3KQ9UBQ5 218 aaKnown RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 RIMS3Q9UJD0 308 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 HMX2A2RU54 273 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CLIC1O00299 241 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ORC5O43913 435 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF432O94892 652 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 DNTTP04053 509 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 PTNP21246 168 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CD68P34810 354 aaPredicted RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 MLLT6P55198 1093 aaPredicted RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 MAZP56270 477 aaKnown RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 YBEYP58557 167 aaPredicted RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 PCBP2Q15366 365 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 USP41Q3LFD5 358 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 PARP15Q460N3 678 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 PGM2L1Q6PCE3 622 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ULK3Q6PHR2 472 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 KCT2Q8NC54 265 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ATP6V1C2Q8NEY4 427 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 NEK7Q8TDX7 302 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 RERGQ96A58 199 aaPredicted RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 LHPPQ9H008 270 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 PIGUQ9H490 435 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ANKRA2Q9H9E1 313 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 GDAP2Q9NXN4 497 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 FBXW2Q9UKT8 454 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 INSIG1O15503 277 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 SEPT4O43236 478 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 CREG1O75629 220 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 TCEA1P23193 301 aaKnown RBP12.58□□□□□ -0.39
SCN1B-202ENST00000415950 PRDX3P30048 256 aaKnown RBP12.58□□□□□ -0.39
SCN1B-202ENST00000415950 TIE1P35590 1138 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 POLR2IP36954 125 aaKnown RBP12.58□□□□□ -0.39
SCN1B-202ENST00000415950 APLP1P51693 650 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 TSC22D1Q15714 1073 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 GTDC1Q4AE62 458 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 PAGE3Q5JUK9 113 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 DTX3Q8N9I9 347 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 MZB1Q8WU39 189 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 HEPHQ9BQS7 1158 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 FAM83DQ9H4H8 585 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 PDLIM7Q9NR12 457 aa12.58□□□□□ -0.39
SCN1B-202ENST00000415950 SMIM35A0A1B0GVV1 85 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 QSOX1O00391 747 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 RFC2P35250 354 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 IFI44LQ53G44 452 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 FAM219BQ5XKK7 198 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 KIAA1161Q6NSJ0 714 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 OAFQ86UD1 273 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 PACRGLQ8N7B6 248 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 CSGALNACT1Q8TDX6 532 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 GPER1Q99527 375 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 MKS1Q9NXB0 559 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 NUDT4Q9NZJ9 180 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 RP1P56715 2156 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 MTRF1O75570 445 aaKnown RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 CCNDBP1O95273 360 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 SOX14O95416 240 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 SPAM1P38567 509 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 CACNG1Q06432 222 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 CBX2Q14781 532 aaPredicted RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 C18orf21Q32NC0 220 aaPredicted RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 TOR1AIP1Q5JTV8 583 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 ENPP6Q6UWR7 440 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 C2CD4AQ8NCU7 369 aaPredicted RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 ZNF563Q8TA94 476 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 TMCO6Q96DC7 493 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 PKP4Q99569 1192 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 AIF1LQ9BQI0 150 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 C1QTNF7Q9BXJ2 289 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 TFB2MQ9H5Q4 396 aaKnown RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 PTBP2Q9UKA9 531 aaKnown RBP12.58□□□□□ -0.4
SCN1B-202ENST00000415950 RNF11Q9Y3C5 154 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 A0A0D9SEW6 157 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 SLC35F4A4IF30 521 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 VIPP01282 170 aa12.58□□□□□ -0.4
SCN1B-202ENST00000415950 TFPIP10646 304 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms