RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 H0YIV9 168 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 KCNJ13O60928 360 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 SEC22BO75396 215 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 RPN2P04844 631 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 ACPPP15309 386 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 CD22P20273 847 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 KELP23276 732 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 GCKP35557 465 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 PXNP49023 591 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-206ENST00000409754 PNLIPRP1P54315 467 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 TBPL1P62380 186 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 PPP2CBP62714 309 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 AP2B1P63010 937 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 PPP2CAP67775 309 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 SLC34A1Q06495 639 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
LIMS2-206ENST00000409754 DOC2AQ14183 400 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 KIAA0040Q15053 153 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 SAMD4BQ5PRF9 694 aaKnown RBP13.64□□□□□ -0.23
LIMS2-206ENST00000409754 LAYNQ6UX15 382 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 DCUN1D3Q8IWE4 304 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 LRRC56Q8IYG6 542 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-206ENST00000409754 MINDY1Q8N5J2 469 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-206ENST00000409754 WDR20Q8TBZ3 569 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 TFGQ92734 400 aaPredicted RBP13.64□□□□□ -0.23
LIMS2-206ENST00000409754 RAD51AP1Q96B01 352 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 CMTM7Q96FZ5 175 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 TIMM29Q9BSF4 260 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 IER2Q9BTL4 223 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 APOOQ9BUR5 198 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 TM7SF3Q9NS93 570 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 PACSIN3Q9UKS6 424 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 ANGPTL2Q9UKU9 493 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 TMED5Q9Y3A6 229 aa13.64□□□□□ -0.23
LIMS2-206ENST00000409754 CACNB4O00305 520 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-206ENST00000409754 CEACAM5P06731 702 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 HOXC4P09017 264 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-206ENST00000409754 XRCC1P18887 633 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-206ENST00000409754 NDUFV2P19404 249 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 NEK2P51955 445 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 TAP2Q03519 686 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 NUMA1Q14980 2115 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 ANGPT1Q15389 498 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 TLR1Q15399 786 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 KIAA1324Q6UXG2 1013 aaKnown RBP13.63□□□□□ -0.23
LIMS2-206ENST00000409754 TRIM69Q86WT6 500 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
LIMS2-206ENST00000409754 DENND6BQ8NEG7 585 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 SETD7Q8WTS6 366 aaKnown RBP13.63□□□□□ -0.23
LIMS2-206ENST00000409754 WDR34Q96EX3 536 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 ZBTB18Q99592 522 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 EBF2Q9HAK2 575 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 S100A14Q9HCY8 104 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 SUCOQ9UBS9 1254 aaKnown RBP13.63□□□□□ -0.23
LIMS2-206ENST00000409754 CD300AQ9UGN4 299 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 DYRK1BQ9Y463 629 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 GPR179Q6PRD1 2367 aa13.63□□□□□ -0.23
LIMS2-206ENST00000409754 ASPDHA6ND91 283 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 FXYD1O00168 92 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 BCAS2O75934 225 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-206ENST00000409754 NPPAP01160 153 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 PRPS2P11908 318 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 HSD3B1P14060 373 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 GABRG2P18507 467 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 HSD3B2P26439 372 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 VARSP26640 1264 aaKnown RBP13.62□□□□□ -0.23
LIMS2-206ENST00000409754 MAPK1P28482 360 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 MAT2AP31153 395 aaKnown RBP13.62□□□□□ -0.23
LIMS2-206ENST00000409754 HSD17B2P37059 387 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 CXCL12P48061 93 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 FLOT2Q14254 428 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 ARHGAP19Q14CB8 494 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 SPATS1Q496A3 300 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 TIGD2Q4W5G0 525 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 USP39Q53GS9 565 aaKnown RBP13.62□□□□□ -0.23
LIMS2-206ENST00000409754 SLCO4C1Q6ZQN7 724 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 FAM124AQ86V42 546 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIMS2-206ENST00000409754 FAM9CQ8IZT9 166 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 LIX1Q8N485 282 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 DPP10Q8N608 796 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 OR5AR1Q8NGP9 310 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 OR5K2Q8NHB8 316 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 VPS33AQ96AX1 596 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 LRRC58Q96CX6 371 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 ASB9Q96DX5 294 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 SCARF2Q96GP6 870 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-206ENST00000409754 EHD1Q9H4M9 534 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 CCDC177Q9NQR7 707 aaPredicted RBP13.62□□□□□ -0.23
LIMS2-206ENST00000409754 ABCD2Q9UBJ2 740 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 PCDHGA11Q9Y5H2 935 aa13.62□□□□□ -0.23
LIMS2-206ENST00000409754 TCRBV21S2A2A0A5A6 115 aa13.61□□□□□ -0.23
LIMS2-206ENST00000409754 ACOT8O14734 319 aa13.61□□□□□ -0.23
LIMS2-206ENST00000409754 SLC31A1O15431 190 aa13.61□□□□□ -0.23
LIMS2-206ENST00000409754 ANP32DO95626 131 aa13.61□□□□□ -0.23
LIMS2-206ENST00000409754 FUCA1P04066 466 aa13.61□□□□□ -0.23
LIMS2-206ENST00000409754 SLC35G4P0C7Q5 338 aa13.61□□□□□ -0.23
LIMS2-206ENST00000409754 ERGP11308 486 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms