RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 USP7Q93009 1102 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SLC7A6OSQ96CW6 309 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-204ENST00000409727 FRG2BQ96QU4 278 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 CCT7Q99832 543 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 TUBB6Q9BUF5 446 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 LRRC61Q9BV99 259 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 GPRC5BQ9NZH0 403 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 CCDC167Q9P0B6 97 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 SPATA7Q9P0W8 599 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 CACNA1IQ9P0X4 2223 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 FANCMQ8IYD8 2048 aa12.03□□□□□ -0.48
CHMP3-204ENST00000409727 A6NCN8 305 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 ZNF839A8K0R7 811 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 B2RBV5 119 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 C9JVG2 144 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 PSMD12O00232 456 aaPredicted RBP12.02□□□□□ -0.48
CHMP3-204ENST00000409727 SLC28A1O00337 649 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 UGDHO60701 494 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 PRR35P0CG20 571 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 COX4I1P13073 169 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 SLC2A4P14672 509 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 PKLRP30613 574 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 SLC19A1P41440 591 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 RPL38P63173 70 aaKnown RBP12.02□□□□□ -0.48
CHMP3-204ENST00000409727 KCNJ2P63252 427 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 PLCL1Q15111 1095 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 RFTN2Q52LD8 501 aaPredicted RBP12.02□□□□□ -0.48
CHMP3-204ENST00000409727 AGKQ53H12 422 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 FAM174AQ8TBP5 190 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 LCN9Q8WX39 176 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 CMTM5Q96DZ9 223 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 CUEDC1Q9NWM3 386 aaPredicted RBP12.02□□□□□ -0.48
CHMP3-204ENST00000409727 PCOLCE2Q9UKZ9 415 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 CCL27Q9Y4X3 112 aa12.02□□□□□ -0.48
CHMP3-204ENST00000409727 POLR3HQ9Y535 204 aaPredicted RBP12.02□□□□□ -0.48
CHMP3-204ENST00000409727 CEP192Q8TEP8 1941 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 A0A1W2PPV9 198 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 TMEM221A6NGB7 291 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 B4DGG1 531 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 M0R296 226 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 SDC3O75056 442 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 SEC22BO75396 215 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 C1GALT1C1LP0DN25 315 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 EZRP15311 586 aaKnown RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 HNF4AP41235 474 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 DHPSP49366 369 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 RASSF2P50749 326 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 CORO7P57737 925 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 ERVK-8P63133 956 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 NXPE4Q6UWF7 544 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 LCTLQ6UWM7 567 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 WASH2PQ6VEQ5 465 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 LPCAT2Q7L5N7 544 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 TRIM46Q7Z4K8 759 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 SPATA19Q7Z5L4 167 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 C17orf64Q86WR6 236 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 DCP2Q8IU60 420 aaKnown RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 ZNF740Q8NDX6 193 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 FAM46DQ8NEK8 389 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 HMGCLL1Q8TB92 370 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 SETD7Q8WTS6 366 aaKnown RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 MAGEB10Q96LZ2 347 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 HAUS8Q9BT25 410 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 DUSP15Q9H1R2 295 aaPredicted RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 SPNS1Q9H2V7 528 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 WASH6PQ9NQA3 447 aa12.02□□□□□ -0.49
CHMP3-204ENST00000409727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 GEMIN8Q9NWZ8 242 aaKnown RBP12.02□□□□□ -0.49
CHMP3-204ENST00000409727 TECTAO75443 2155 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 PIPSLA2A3N6 862 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 BCAT2O15382 392 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-204ENST00000409727 GYG2O15488 501 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 C21orf59P57076 290 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 CUL3Q13618 768 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 CYLC2Q14093 348 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-204ENST00000409727 WDR45BQ5MNZ6 344 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 IL23RQ5VWK5 629 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 ATG9BQ674R7 924 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 OGFOD2Q6N063 350 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 MED27Q6P2C8 311 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 IYDQ6PHW0 289 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 ASRGL1Q7L266 308 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 ADCK2Q7Z695 626 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 C1orf210Q8IVY1 113 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 MIER2Q8N344 545 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 CHCHD4Q8N4Q1 142 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 OR7G3Q8NG95 312 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 OR2L8Q8NGY9 312 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 C1orf216Q8TAB5 229 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 LMX1AQ8TE12 382 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 PPP3R2Q96LZ3 170 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 RAB11FIP5Q9BXF6 653 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 LRMDAQ9H2I8 198 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 KIR3DX1Q9H7L2 352 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 LRTM1Q9HBL6 345 aa12.01□□□□□ -0.49
CHMP3-204ENST00000409727 PRMT8Q9NR22 394 aaPredicted RBP12.01□□□□□ -0.49
CHMP3-204ENST00000409727 SDK1Q7Z5N4 2213 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms