RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 HAS3O00219 553 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 IGFBP1P08833 259 aaPredicted RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 INPP1P49441 399 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 EMX2Q04743 252 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 CDK5R2Q13319 367 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 CRHR2Q13324 411 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 INTS11Q5TA45 600 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 Q6ZNX1 250 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 ADAMTSL2Q86TH1 951 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 TRPV1Q8NER1 839 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 TRIB2Q92519 343 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 TRIM62Q9BVG3 475 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 DERL2Q9GZP9 239 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 OR51B5Q9H339 312 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 EHD1Q9H4M9 534 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 TMEM248Q9NWD8 314 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 THUMPD1Q9NXG2 353 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 KLHL3Q9UH77 587 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 PADI4Q9UM07 663 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 TPRKBQ9Y3C4 175 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 A0A0U1RQF3 1178 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 MBLAC1A4D2B0 266 aaPredicted RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 ANKDD1BA6NHY2 528 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 SLC38A8A6NNN8 435 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 EEDO75530 441 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 CH25HO95992 272 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 ENO2P09104 434 aaPredicted RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 PEPDP12955 493 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 SLC11A1P49279 550 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 GP2P55259 537 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 CAV3P56539 151 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 EEFSECP57772 596 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 NFE2L1Q14494 772 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 ARMC4Q5T2S8 1044 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 SPRYD7Q5W111 196 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 FUT10Q6P4F1 479 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 VRK3Q8IV63 474 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 C1orf52Q8N6N3 182 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 OR4A15Q8NGL6 344 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 PTCD2Q8WV60 388 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 BIRC8Q96P09 236 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 IL37Q9NZH6 218 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 SLC6A14Q9UN76 642 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 CPQQ9Y646 472 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 THSD7AQ9UPZ6 1657 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 CASP8AP2Q9UKL3 1982 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 DYTNA2CJ06 578 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 GLOD5A6NK44 160 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 PDZK1P1A8MUH7 402 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 MANBAO00462 879 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 SLC22A2O15244 555 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 PEX11BO96011 259 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 FABP3P05413 133 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 LAMP1P11279 417 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 ETFAP13804 333 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 SPNP16150 400 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 PORP16435 677 aaPredicted RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 RPP38P78345 283 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 CD83Q01151 205 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 CNTN1Q12860 1018 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 CLCA4Q14CN2 919 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 TSTQ16762 297 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 TIGD6Q17RP2 521 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 CCSMST1Q4G0I0 132 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 Q6ZVU0 165 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 OTOP2Q7RTS6 562 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 B3GNT8Q7Z7M8 397 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 ZNF605Q86T29 641 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 DCP2Q8IU60 420 aaKnown RBP8.1□□□□□ -1.11
SNX13-201ENST00000409076 TRAPPC5Q8IUR0 188 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 PHYKPLQ8IUZ5 450 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 UMODL1-AS1Q8N2C9 162 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 LGALS12Q96DT0 336 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 SUSD3Q96L08 255 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 MACROD1Q9BQ69 325 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 ATP13A3Q9H7F0 1226 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 RMND5AQ9H871 391 aa8.1□□□□□ -1.11
SNX13-201ENST00000409076 LOC110117498-PIK3R3F6TDL0 507 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 KPNA3O00505 521 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 CTDSP2O14595 271 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 HYAL3O43820 417 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 CAPNS1P04632 268 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 IL6P05231 212 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 GGT1P19440 569 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 RECQLP46063 649 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 PTPN5P54829 565 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 SNRPD2P62316 118 aaKnown RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 IFITM3Q01628 133 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 TAF1AQ15573 450 aaPredicted RBP8.09□□□□□ -1.11
SNX13-201ENST00000409076 PARP15Q460N3 678 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 FAM171BQ6P995 826 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 DLEU7Q6UYE1 221 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 MMP21Q8N119 569 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 IRGQQ8WZA9 623 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 GTF2H4Q92759 462 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 IL17FQ96PD4 163 aa8.09□□□□□ -1.11
SNX13-201ENST00000409076 MBOAT4Q96T53 435 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms