RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 HLA-DQB1P01920 261 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HMGN1P05114 100 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ANXA5P08758 320 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HIST1H2AGP0C0S8 130 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 TSPAN19P0C672 248 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ADORA3P0DMS8 318 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 TXNP10599 105 aaKnown RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 SLC2A2P11168 524 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 G6PDP11413 515 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 PSKH1P11801 424 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ANXA3P12429 323 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HOXD8P13378 290 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MTHFD2P13995 350 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HSD3B1P14060 373 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 TYRP14679 529 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 EPB42P16452 691 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ZNF30P17039 623 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GPX2P18283 190 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HDCP19113 662 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 CD53P19397 219 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 RAB3AP20336 220 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HIST1H2ADP20671 130 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 AGXTP21549 392 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 LPOP22079 712 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 CHMP24386 653 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GADD45AP24522 165 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ITGB7P26010 798 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HSD3B2P26439 372 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 STOMP27105 288 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ARNTP27540 789 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 RPL10P27635 214 aaKnown RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MZF1P28698 734 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HOXD11P31277 338 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 FMO3P31513 532 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 SLC6A4P31645 630 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 RORAP35398 523 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GGT5P36269 586 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 TGFBR2P37173 567 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 PIGAP37287 484 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 IFNGR2P38484 337 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 KIR3DL1P43629 444 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MAPK8P45983 427 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MAP2K4P45985 399 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 CCR10P46092 362 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MAP2K3P46734 347 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 KCNC1P48547 511 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MAPKAPK2P49137 400 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ANXA11P50995 505 aaKnown RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 DAPP51397 102 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 EPHA4P54764 986 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MLLT6P55198 1093 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 C21orf58P58505 322 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MTPNP58546 118 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 RRAS2P62070 204 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 SNRPGP62308 76 aaKnown RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 LSM3P62310 102 aaKnown RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 PSPHP78330 225 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 JAG1P78504 1218 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 DAB2P98082 770 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GALK2Q01415 458 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 RGS1Q08116 209 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 COX10Q12887 443 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ADAM15Q13444 863 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GTF2H2Q13888 395 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 KCNC3Q14003 757 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 SIM2Q14190 667 aaPredicted RBP2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ZNF235Q14590 738 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ZNF460Q14592 562 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 IRF3Q14653 427 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 TMEM132BQ14DG7 1078 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 SPHARQ15513 63 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MED22Q15528 200 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 TRAM1Q15629 374 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GPR19Q15760 415 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 AMHR2Q16671 573 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 DUSP6Q16828 381 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 DUOXA1Q1HG43 343 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 MICAQ29983 383 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 HKDC1Q2TB90 917 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 FAM174BQ3ZCQ3 159 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GGTA1PQ4G0N0 100 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 BCL7AQ4VC05 210 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 IFI44LQ53G44 452 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 PYDC2Q56P42 97 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 XKR4Q5GH76 650 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 SLC25A30Q5SVS4 291 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ZBTB37Q5TC79 503 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GARNL3Q5VVW2 1013 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 ZDHHC20Q5W0Z9 365 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 CD276Q5ZPR3 534 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 AFMIDQ63HM1 303 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 EEF1DP3Q658K8 133 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 PLAG1Q6DJT9 500 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 KIAA1211LQ6NV74 962 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 GTF2H2CQ6P1K8 395 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 TRIM40Q6P9F5 258 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 KLHL17Q6TDP4 642 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 KDELC1Q6UW63 502 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 CASP12Q6UXS9 341 aa2.76□□□□□ -1.97
SNORD88.1-201ENST00000408684 UNC5DQ6UXZ4 953 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms