RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RBFAQ8N0V3 343 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CLHC1Q8NHS4 586 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 TCF25Q9BQ70 676 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 TTLL2Q9BWV7 592 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 APOL5Q9BWW9 433 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 BTBD2Q9BX70 525 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 NACA2Q9H009 215 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCDC47-202ENST00000403162 LOC730098B7Z3J9 87 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CCNDBP1O95273 360 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 S100A3P33764 101 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 MASP1P48740 699 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 DAPP51397 102 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 HIST2H2ACQ16777 129 aaPredicted RBP19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CARD16Q5EG05 197 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 ADCK1Q86TW2 530 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 DENND1CQ8IV53 801 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CADM3Q8N126 398 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 ELMOD1Q8N336 334 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 SVOPQ8N4V2 548 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 ZNF461Q8TAF7 563 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 POF1BQ8WVV4 589 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 ULK4Q96C45 1275 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 RIBC2Q9H4K1 309 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 RDH14Q9HBH5 336 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 TM9SF3Q9HD45 589 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 CCNB1IP1Q9NPC3 277 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 LHX3Q9UBR4 397 aa19.29■□□□□ 0.68
CCDC47-202ENST00000403162 AFF4Q9UHB7 1163 aaKnown RBP19.29■□□□□ 0.68
CCDC47-202ENST00000403162 TEX28O15482 410 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 LILRB3O75022 631 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 PRAMEF12O95522 483 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 EPB42P16452 691 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 ITGB6P18564 788 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 TMED10P49755 219 aaKnown RBP19.28■□□□□ 0.68
CCDC47-202ENST00000403162 ST13P50502 369 aaKnown RBP19.28■□□□□ 0.68
CCDC47-202ENST00000403162 HNRNPFP52597 415 aaKnown RBP19.28■□□□□ 0.68
CCDC47-202ENST00000403162 ERVFC1P60507 584 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 VBP1P61758 197 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 CREMQ03060 361 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 CD300CQ08708 224 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 TWF1Q12792 350 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 GBX1Q14549 363 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 TTLL9Q3SXZ7 439 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 RNF219Q5W0B1 726 aaPredicted RBP19.28■□□□□ 0.68
CCDC47-202ENST00000403162 LAIR1Q6GTX8 287 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 OR2T5Q6IEZ7 315 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 GPR65Q8IYL9 337 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 OR2T29Q8NH02 315 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 SPPL3Q8TCT6 385 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 SLC35B4Q969S0 331 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 APOL4Q9BPW4 351 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 BOCQ9BWV1 1114 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 IL1RAPQ9NPH3 570 aa19.28■□□□□ 0.68
CCDC47-202ENST00000403162 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 SLC38A8A6NNN8 435 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 C5orf67F2Z3F1 127 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 GAPDHSO14556 408 aaPredicted RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 SLC25A14O95258 325 aaPredicted RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 NTRK1P04629 796 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 MYCLP1P12525 358 aaPredicted RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 ARHGDIAP52565 204 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 RAB33AQ14088 237 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 SIM2Q14190 667 aaPredicted RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PAGE2BQ5JRK9 111 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 TPGS2Q68CL5 300 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PLEKHG7Q6ZR37 379 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 CEP68Q76N32 757 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 FAM9CQ8IZT9 166 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 ZBTB2Q8N680 514 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 BARD1Q99728 777 aaKnown RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 INPP5KQ9BT40 448 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 ASPSCR1Q9BZE9 553 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 ACPTQ9BZG2 426 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PARVBQ9HBI1 364 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PCDHB9Q9Y5E1 797 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 TSPAN3O60637 253 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 ABLIM3O94929 683 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PRAMEF1O95521 474 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 KRT6AP02538 564 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 MT-ND2P03891 347 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 KRT6BP04259 564 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 RB1P06400 928 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PRPS2P11908 318 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 KRT6CP48668 564 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 GPRC6AQ5T6X5 926 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PLPP4Q5VZY2 271 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 CXorf57Q6NSI4 855 aaKnown RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 FAM151BQ6UXP7 276 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PGBD3Q8N328 593 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 TESCQ96BS2 214 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PLD4Q96BZ4 506 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 ALOXE3Q9BYJ1 711 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PBX4Q9BYU1 374 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 NDRG4Q9ULP0 352 aaKnown RBP19.27■□□□□ 0.68
CCDC47-202ENST00000403162 ABCG2Q9UNQ0 655 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 DLGAP4Q9Y2H0 992 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 GMPPBQ9Y5P6 360 aa19.27■□□□□ 0.68
CCDC47-202ENST00000403162 PRSS21Q9Y6M0 314 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms