RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 RPLP0P05388 317 aaKnown RBP13.6□□□□□ -0.23
APOB-202ENST00000399256 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 CRISP3P54108 245 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 DEFA1P59665 94 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 DEFA3P59666 94 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 RPS14P62263 151 aaKnown RBP13.6□□□□□ -0.23
APOB-202ENST00000399256 CAMK2BQ13554 666 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 C10orf120Q5SQS8 335 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 LRIF1Q5T3J3 769 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 ULK4Q96C45 1275 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 HSH2DQ96JZ2 352 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 MGME1Q9BQP7 344 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 ARIH1Q9Y4X5 557 aaPredicted RBP13.6□□□□□ -0.23
APOB-202ENST00000399256 PCDHGA6Q9Y5G7 932 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 DOCK3Q8IZD9 2030 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 DRGXA6NNA5 263 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 MANBAO00462 879 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 HOXD9P28356 352 aaPredicted RBP13.6□□□□□ -0.23
APOB-202ENST00000399256 MRPS15P82914 257 aaKnown RBP13.6□□□□□ -0.23
APOB-202ENST00000399256 SREBF2Q12772 1141 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 NXNL2Q5VZ03 156 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 NADSYN1Q6IA69 706 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 C17orf99Q6UX52 265 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 SLC46A3Q7Z3Q1 461 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 OR6F1Q8NGZ6 308 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 FCGR1BQ92637 280 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 OR2B2Q9GZK3 357 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 REEP1Q9H902 201 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 AASDHPPTQ9NRN7 309 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 ERVK13-1Q9NX77 482 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 DHRS7Q9Y394 339 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 SNX8Q9Y5X2 465 aa13.6□□□□□ -0.23
APOB-202ENST00000399256 M0QZQ0 153 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 INSIG1O15503 277 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 TACR1P25103 407 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 PTPN6P29350 595 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 YBEYP58557 167 aaPredicted RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 FAM189BP81408 668 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 ELP6Q0PNE2 266 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 SLX4IPQ5VYV7 408 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 MBOAT1Q6ZNC8 495 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 TCAIMQ8N3R3 496 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 KBTBD8Q8NFY9 601 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 ZNF675Q8TD23 568 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 TPD52L3Q96J77 140 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 KCNS3Q9BQ31 491 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 NXF2Q9GZY0 626 aaKnown RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 MARCH2Q9P0N8 246 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 PPT2Q9UMR5 302 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 FAM172BPA6NC97 362 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 RFXANKO14593 260 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 ESR1P03372 595 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 TP53BP2Q13625 1128 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 CPSF6Q16630 551 aaKnown RBP eCLIP13.59□□□□□ -0.23
APOB-202ENST00000399256 PDE12Q6L8Q7 609 aaKnown RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 TBC1D20Q96BZ9 403 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 PITX2Q99697 317 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 TTPALQ9BTX7 342 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 ACPTQ9BZG2 426 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 ADPRHL2Q9NX46 363 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 GPR83Q9NYM4 423 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 MN1Q10571 1320 aaPredicted RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 M0QZ92 97 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 HAS3O00219 553 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 STSP08842 583 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 PTGER3P43115 390 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 TM4SF4P48230 202 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 CLCN4P51793 760 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 TBCEQ15813 527 aaPredicted RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 BCL7AQ4VC05 210 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 SPANXN2Q5MJ10 180 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 PTRHD1Q6GMV3 140 aaKnown RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 OR4F3Q6IEY1 312 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 TTC9BQ8N6N2 239 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 LKAAEAR1Q8TD35 194 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 GGHQ92820 318 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 CIPCQ9C0C6 399 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 UBA2Q9UBT2 640 aaPredicted RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 RAPGEFL1Q9UHV5 662 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 PSORS1C1Q9UIG5 152 aa13.59□□□□□ -0.23
APOB-202ENST00000399256 WBP11Q9Y2W2 641 aaKnown RBP13.59□□□□□ -0.23
APOB-202ENST00000399256 MOXD2PA6NHM9 499 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 COL6A1P12109 1028 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 TRIM46Q7Z4K8 759 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 OR8H2Q8N162 312 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 CHAC2Q8WUX2 184 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 EGLN2Q96KS0 407 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 CD244Q9BZW8 370 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 P2RY12Q9H244 342 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 RAD18Q9NS91 495 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 CCDC59Q9P031 241 aaKnown RBP13.58□□□□□ -0.24
APOB-202ENST00000399256 MAN2B2Q9Y2E5 1009 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 RAI2Q9Y5P3 530 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 PEX16Q9Y5Y5 336 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 NOTOA8MTQ0 251 aa13.58□□□□□ -0.24
APOB-202ENST00000399256 GLUD1P00367 558 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms