RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 E2F1Q01094 437 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ARHGAP19Q14CB8 494 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SMTNL2Q2TAL5 461 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ACSM3Q53FZ2 586 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 LLGL2Q6P1M3 1020 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TFAP2DQ7Z6R9 452 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MISPQ8IVT2 679 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FAM71AQ8IYT1 594 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NIPA2Q8N8Q9 360 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GEMIN6Q8WXD5 167 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 UPRTQ96BW1 309 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MCRS1Q96EZ8 462 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SIPA1Q96FS4 1042 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FAM84AQ96KN4 292 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PNKPQ96T60 521 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SMOC2Q9H3U7 446 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 RC3H2Q9HBD1 1191 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 ACSS1Q9NUB1 689 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 RBMX2Q9Y388 322 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 KIR2DS5A0A0G2JLQ3 304 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 A0A0G2JNG1 304 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 A0A1W2PPC1 479 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 H0Y858 1186 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 KIR2DS3K7RE56 304 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 RFXANKO14593 260 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC30A4O14863 429 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DDNO94850 711 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 EPOP01588 193 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 P04436 131 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FOSL2P15408 326 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CHRNB2P17787 502 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GABRR2P28476 465 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HOXD12P35452 270 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 STARP49675 285 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NOVA1P51513 510 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 TPTEP56180 551 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CTBP2P56545 445 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 KDSRQ06136 332 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF155Q12901 538 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 KIR2DS5Q14953 304 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 LLGL1Q15334 1064 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TARBP2Q15633 366 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZACNQ401N2 412 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 RBM20Q5T481 1227 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 OGFOD2Q6N063 350 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 THAP5Q7Z6K1 395 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FAM228AQ86W67 206 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ECHDC2Q86YB7 292 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 C1orf174Q8IYL3 243 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 EDEM1Q92611 657 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 HLA-CQ95604 372 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZBTB9Q96C00 473 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 NMD3Q96D46 503 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 MAELQ96JY0 434 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 CNDP2Q96KP4 475 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 MARK4Q96L34 752 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 C1orf74Q96LT6 269 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 AP1S3Q96PC3 154 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ACO2Q99798 780 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 TMEM246Q9BRR3 403 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 POPDC3Q9HBV1 291 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SSU72Q9NP77 194 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 EXOSC4Q9NPD3 245 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 CD320Q9NPF0 282 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 IMP3Q9NV31 184 aaKnown RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 CMTM6Q9NX76 183 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 STOX2Q9P2F5 926 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 P2RX2Q9UBL9 471 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 LHX6Q9UPM6 363 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MED31Q9Y3C7 131 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 MTF2Q9Y483 593 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 MPDZO75970 2070 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PRR36Q9H6K5 1346 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 A6NCN8 305 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 KCNU1A8MYU2 1149 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CENPBD1B2RD01 187 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SEC14L5O43304 696 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SSNA1O43805 119 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CLIC3O95833 236 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 ANGPTL1O95841 491 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SERPINA6P08185 405 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 FAM228BP0C875 321 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CXCL8P10145 99 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DRD2P14416 443 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 UGT1A4P22310 534 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 COILP38432 576 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 ZNF280AP59817 542 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 TUBA1BP68363 451 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 SLC3A1Q07837 685 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 METTL21CQ5VZV1 264 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PM20D1Q6GTS8 502 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TMEM154Q6P9G4 183 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GDPD4Q6W3E5 623 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TUBA1AQ71U36 451 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CMTM8Q8IZV2 173 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 CCDC24Q8N4L8 307 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 TAB3Q8N5C8 712 aaPredicted RBP2.66□□□□□ -1.98
CHD9-202ENST00000398510 LRRC57Q8N9N7 239 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 COLGALT1Q8NBJ5 622 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 OR4A15Q8NGL6 344 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms