RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CXCR4P61073 352 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 TWF1Q12792 350 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 IRF5Q13568 498 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 RTP2Q5QGT7 225 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 ATAD3BQ5T9A4 648 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 CLECL1Q8IZS7 167 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 CLIP4Q8N3C7 705 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 TBC1D20Q96BZ9 403 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 C7orf34Q96L11 122 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 RLIMQ9NVW2 624 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 RNF6Q9Y252 685 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 WNT9AO14904 365 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 NEK5Q6P3R8 708 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 FAHD1Q6P587 224 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 RFLNAQ6ZTI6 216 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
NUP98-204ENST00000397004 SCAIQ8N9R8 606 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 ZBTB18Q99592 522 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 ASPSCR1Q9BZE9 553 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 DCSTAMPQ9H295 470 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 TAS2R16Q9NYV7 291 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 GABRQQ9UN88 632 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 PRAMEF25A6NGN4 478 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 ERN1O75460 977 aaKnown RBP13.53□□□□□ -0.24
NUP98-204ENST00000397004 PGLSO95336 258 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 UBE2UQ5VVX9 321 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 PTRHD1Q6GMV3 140 aaKnown RBP13.53□□□□□ -0.24
NUP98-204ENST00000397004 ADNP2Q6IQ32 1131 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 ZCCHC8Q6NZY4 707 aaKnown RBP13.53□□□□□ -0.24
NUP98-204ENST00000397004 TRAF7Q6Q0C0 670 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 ARMC8Q8IUR7 673 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 ZNF513Q8N8E2 541 aaPredicted RBP13.53□□□□□ -0.24
NUP98-204ENST00000397004 SDHCQ99643 169 aaPredicted RBP13.53□□□□□ -0.24
NUP98-204ENST00000397004 CTRCQ99895 268 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 BCL7BQ9BQE9 202 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 WWOXQ9NZC7 414 aa13.53□□□□□ -0.24
NUP98-204ENST00000397004 A0A1W2PQ67 120 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 SLC28A1O00337 649 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 COCHO43405 550 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.24
NUP98-204ENST00000397004 ACPPP15309 386 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 TNFRSF1BP20333 461 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 TCEA1P23193 301 aaKnown RBP13.52□□□□□ -0.24
NUP98-204ENST00000397004 NFATC2Q13469 925 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 CACHD1Q5VU97 1274 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 MAL2Q969L2 176 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 HSH2DQ96JZ2 352 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 HOXD1Q9GZZ0 328 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 OLA1Q9NTK5 396 aaKnown RBP13.52□□□□□ -0.24
NUP98-204ENST00000397004 VPS9D1Q9Y2B5 631 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 TSC22D4Q9Y3Q8 395 aa13.52□□□□□ -0.24
NUP98-204ENST00000397004 CLDN7O95471 211 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 EBLN1P0CF75 366 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 AKR1A1P14550 325 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 B4GALNT1Q00973 533 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 CDC20Q12834 499 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 FADDQ13158 208 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 UGT8Q16880 541 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 RNF165Q6ZSG1 346 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 TSPYL5Q86VY4 417 aaPredicted RBP13.52□□□□□ -0.25
NUP98-204ENST00000397004 CARNMT1Q8N4J0 409 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 TP53INP1Q96A56 240 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 TM9SF3Q9HD45 589 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 TRPS1Q9UHF7 1281 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 COMMD10Q9Y6G5 202 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 FAM20BO75063 409 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 STC2O76061 302 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 ASGR1P07306 291 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 ST13P50502 369 aaKnown RBP13.52□□□□□ -0.25
NUP98-204ENST00000397004 ABHD18Q0P651 414 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 NPRL3Q12980 569 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 PDE12Q6L8Q7 609 aaKnown RBP13.52□□□□□ -0.25
NUP98-204ENST00000397004 GPR153Q6NV75 609 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 VRK3Q8IV63 474 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 MCFD2Q8NI22 146 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 DACH2Q96NX9 599 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 PITX2Q99697 317 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 FAM126AQ9BYI3 521 aaPredicted RBP13.52□□□□□ -0.25
NUP98-204ENST00000397004 TM6SF2Q9BZW4 377 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 MARCH5Q9NX47 278 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 TPRKBQ9Y3C4 175 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 CDH23Q9H251 3354 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.25
NUP98-204ENST00000397004 ILVBLA1L0T0 632 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 RECQL5O94762 991 aaPredicted RBP13.51□□□□□ -0.25
NUP98-204ENST00000397004 CCNDBP1O95273 360 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 RHOCP08134 193 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ENGP17813 658 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 CAP1Q01518 475 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ARHGEF7Q14155 803 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 RFX4Q33E94 735 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 KIAA1614Q5VZ46 1190 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 DESI1Q6ICB0 168 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 C17orf99Q6UX52 265 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 TSPAN33Q86UF1 283 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 CELF2-AS1Q8N7Q2 184 aa13.51□□□□□ -0.25
NUP98-204ENST00000397004 ZHX1-C8orf76Q96EF9 292 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms