RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 SPTBP11277 2137 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 COL8A1P27658 744 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 PDHA2P29803 388 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 GP5P40197 560 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 CDKN1CP49918 316 aaPredicted RBP17.97■□□□□ 0.47
SNCB-202ENST00000393693 NCF4Q15080 339 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 MED25Q71SY5 747 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 TRABD2AQ86V40 505 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 EXOC3L1Q86VI1 746 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 CYP4X1Q8N118 509 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 TMEM102Q8N9M5 508 aaPredicted RBP17.97■□□□□ 0.47
SNCB-202ENST00000393693 OR52E1Q8NGJ3 308 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 PNPLA2Q96AD5 504 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 ALKBH8Q96BT7 664 aaKnown RBP17.97■□□□□ 0.47
SNCB-202ENST00000393693 SMC6Q96SB8 1091 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 SLC7A5P2Q9GIP4 190 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 OR52A5Q9H2C5 316 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 COG4Q9H9E3 785 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 CUEDC1Q9NWM3 386 aaPredicted RBP17.97■□□□□ 0.47
SNCB-202ENST00000393693 GPR83Q9NYM4 423 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 SERTAD3Q9UJW9 196 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 HEBP2Q9Y5Z4 205 aa17.97■□□□□ 0.47
SNCB-202ENST00000393693 MATN2O00339 956 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 ZNF749O43361 778 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 LDB2O43679 373 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 VAPBO95292 243 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 ATP1B2P14415 290 aaPredicted RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 OTX2P32243 289 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 SPRP35270 261 aaPredicted RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 CSE1LP55060 971 aaKnown RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 PRAMEP78395 509 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 PRKG2Q13237 762 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 PLEKHN1Q494U1 663 aaPredicted RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 HSP90AA5PQ58FG0 334 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 TEDDM1Q5T9Z0 273 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 ZNF385CQ66K41 422 aaPredicted RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 PACS1Q6VY07 963 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 CDHR3Q6ZTQ4 885 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 SRRM1Q8IYB3 904 aaKnown RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 NXPE1Q8N323 547 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 COPS8Q99627 209 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 SMAD5Q99717 465 aaKnown RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 SELENOSQ9BQE4 189 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 PITPNM3Q9BZ71 974 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 SYTL2Q9HCH5 934 aa17.96■□□□□ 0.47
SNCB-202ENST00000393693 IARS2Q9NSE4 1012 aaKnown RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 G3BP2Q9UN86 482 aaKnown RBP17.96■□□□□ 0.47
SNCB-202ENST00000393693 ESPL1Q14674 2120 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 CCDC78A2IDD5 438 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 E7EQ34 232 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 MASP2O00187 686 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 PRSS56P0CW18 603 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 CBSLP0DN79 551 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 RALBP11234 206 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 CBSP35520 551 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 FOXL2P58012 376 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 ACVR1Q04771 509 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 ZNF658BQ4V348 819 aaPredicted RBP17.95■□□□□ 0.46
SNCB-202ENST00000393693 ZNF787Q6DD87 383 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 ADGRF3Q8IZF5 1079 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 ULK4Q96C45 1275 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 SNRNP40Q96DI7 357 aaKnown RBP17.95■□□□□ 0.46
SNCB-202ENST00000393693 SGSM3Q96HU1 749 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 ZNF778Q96MU6 729 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 HGH1Q9BTY7 390 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 TFB2MQ9H5Q4 396 aaKnown RBP17.95■□□□□ 0.46
SNCB-202ENST00000393693 FAM60AQ9NP50 221 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 SSU72Q9NP77 194 aaKnown RBP17.95■□□□□ 0.46
SNCB-202ENST00000393693 ACTR10Q9NZ32 417 aa17.95■□□□□ 0.46
SNCB-202ENST00000393693 C17orf113A0A1B0GUU1 675 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 TRIM49D1C9J1S8 452 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 HCRTR1O43613 425 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 KLF7O75840 302 aaPredicted RBP17.94■□□□□ 0.46
SNCB-202ENST00000393693 PIAS1O75925 651 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 CTSBP07858 339 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 MSL3P1P0C860 447 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 HADHAP40939 763 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 ZNF140P52738 457 aaPredicted RBP17.94■□□□□ 0.46
SNCB-202ENST00000393693 RRADP55042 308 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 NR6A1Q15406 480 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 DEFB110Q30KQ9 67 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 C1orf189Q5VU69 101 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 MLIPQ5VWP3 458 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 NEPROQ6NW34 567 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 KIAA0408Q6ZU52 694 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 SNX20Q7Z614 316 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 STRA8Q7Z7C7 330 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 TRIM73Q86UV7 250 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 AMIGO1Q86WK6 493 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 HPS6Q86YV9 775 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 TMEM151BQ8IW70 566 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 CNTN4Q8IWV2 1026 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 CISD2Q8N5K1 135 aaKnown RBP17.94■□□□□ 0.46
SNCB-202ENST00000393693 OR6P1Q8NGX9 317 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 TCTN2Q96GX1 697 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 C19orf43Q9BQ61 176 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 SLC29A3Q9BZD2 475 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 SPRTNQ9H040 489 aaPredicted RBP17.94■□□□□ 0.46
SNCB-202ENST00000393693 KCNK9Q9NPC2 374 aa17.94■□□□□ 0.46
SNCB-202ENST00000393693 ASF1BQ9NVP2 202 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms