RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZXDCQ2QGD7 858 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 LINC00303Q3SY05 128 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 KBTBD12Q3ZCT8 623 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 TAF1BQ53T94 588 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 THEMIS2Q5TEJ8 643 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 UGT3A1Q6NUS8 523 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 FAM198BQ6UWH4 519 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ADCK2Q7Z695 626 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CTAGE6Q86UF2 777 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC26A11Q86WA9 606 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 PLD3Q8IV08 490 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 MCATQ8IVS2 390 aaKnown RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CTAGE4Q8IX94 777 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 LRRC56Q8IYG6 542 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 GPR135Q8IZ08 494 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 DSELQ8IZU8 1212 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR4N4Q8N0Y3 316 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 PPM1NQ8N819 430 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ENDOVQ8N8Q3 282 aaKnown RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZSCAN1Q8NBB4 408 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 KIF18AQ8NI77 898 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SNRNP27Q8WVK2 155 aaKnown RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ANKRD49Q8WVL7 239 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SMPDL3AQ92484 453 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SEC14L1Q92503 715 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC22A18Q96BI1 424 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 PYCR2Q96C36 320 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 MED8Q96G25 268 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLC45A3Q96JT2 553 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 UBL7Q96S82 380 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 MCMBPQ9BTE3 642 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 DPH7Q9BTV6 452 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ATG10Q9H0Y0 220 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 RHOJQ9H4E5 214 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 ACTL8Q9H568 366 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 UTP6Q9NYH9 597 aaKnown RBP7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 EURLQ9NYK6 297 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 SERTAD3Q9UJW9 196 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 PADI1Q9ULC6 663 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 PLCL2Q9UPR0 1127 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 PCDHB3Q9Y5E6 796 aa7.36□□□□□ -1.23
HMGB3P1-201ENST00000393368 CDC14CA4D256 554 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZNF891A8MT65 544 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 KIF2AO00139 706 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 EIF3FO00303 357 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ATXN7O15265 892 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 KALRNO60229 2985 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 MT-ND3P03897 115 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 EIF2S1P05198 315 aaKnown RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 C8GP07360 202 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 CAPN1P07384 714 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 MSL3P1P0C860 447 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZNF37AP17032 561 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ITGAXP20702 1163 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 CMPK1P30085 196 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 VSX2P58304 361 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 RHDQ02161 417 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 SP140Q13342 867 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 NAE1Q13564 534 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 IL10RAQ13651 578 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 BMPR2Q13873 1038 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 USP10Q14694 798 aaKnown RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 SLMAPQ14BN4 828 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 DEFB109BQ30KR1 87 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 C18orf21Q32NC0 220 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 PRAMEF13Q5VWM6 474 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ICE2Q659A1 982 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZNF385CQ66K41 422 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 AGTRAPQ6RW13 159 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 SBSNQ6UWP8 590 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 TTLL10Q6ZVT0 673 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 CMC1Q7Z7K0 106 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 GSPT2Q8IYD1 628 aaKnown RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 EXD3Q8N9H8 876 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 FBXO15Q8NCQ5 510 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 MNS1Q8NEH6 495 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR8K5Q8NH50 307 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 CDKL2Q92772 493 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 RBBP8Q99708 897 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 SELENOSQ9BQE4 189 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 PARVBQ9HBI1 364 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 SYTL2Q9HCH5 934 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 GPAMQ9HCL2 828 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 MRPS30Q9NP92 439 aaKnown RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 CCDC177Q9NQR7 707 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 INTS7Q9NVH2 962 aaKnown RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 ARL15Q9NXU5 204 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 NSMCE4AQ9NXX6 385 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 NINJ2Q9NZG7 142 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 TXNDC16Q9P2K2 825 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 NDOR1Q9UHB4 597 aa7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 CORO1CQ9ULV4 474 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P1-201ENST00000393368 PTPRQQ9UMZ3 2332 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 OR2A25A4D2G3 310 aa7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 NCF1BA6NI72 391 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 NCF1CA8MVU1 366 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P1-201ENST00000393368 H0YGG7 62 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms