RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 NR6A1Q15406 480 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 HIF1AQ16665 826 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 RNF187Q5TA31 235 aaPredicted RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 ZNF470Q6ECI4 717 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 NEPROQ6NW34 567 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 KIRREL2Q6UWL6 708 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 RNF44Q7L0R7 432 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 HPS6Q86YV9 775 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 AGGF1Q8N302 714 aaeCLIP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 RAB42Q8N4Z0 105 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 ZNF669Q96BR6 464 aaPredicted RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 C10orf90Q96M02 699 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 ILKAPQ9H0C8 392 aaPredicted RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 WDR54Q9H977 334 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 FBXO6Q9NRD1 293 aaPredicted RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 ABCF3Q9NUQ8 709 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 NTNG1Q9Y2I2 539 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 PPP2R2CQ9Y2T4 447 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 IGKV1-8A0A0C4DH67 115 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 ONECUT2O95948 504 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 PKMP14618 531 aaKnown RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 OGNP20774 298 aaKnown RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 MAGEA6P43360 314 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 CLCN7P51798 805 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 CTBP1Q13363 440 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 DHX34Q14147 1143 aaKnown RBP15.84■□□□□ 0.13
PTPRK-208ENST00000392449 FBXO42Q6P3S6 717 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 ZNF549Q6P9A3 640 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 CUZD1Q86UP6 607 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 PARP9Q8IXQ6 854 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 IQCKQ8N0W5 287 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 OR9A1PQ8NGU1 263 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 PRR7Q8TB68 274 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 TCF12Q99081 682 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 PKP4Q99569 1192 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 SLC26A1Q9H2B4 701 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 SPATA7Q9P0W8 599 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 MED16Q9Y2X0 877 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 KLK4Q9Y5K2 254 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 FAM169AQ9Y6X4 670 aa15.84■□□□□ 0.13
PTPRK-208ENST00000392449 HEATR5BQ9P2D3 2071 aa15.83■□□□□ 0.13
PTPRK-208ENST00000392449 OR2A25A4D2G3 310 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 E5RI56 91 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 PSIP1O75475 530 aaKnown RBP15.83■□□□□ 0.12
PTPRK-208ENST00000392449 ALBP02768 609 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 ERGP11308 486 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 ATP5DP30049 168 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 ADARP55265 1226 aaKnown RBP15.83■□□□□ 0.12
PTPRK-208ENST00000392449 Q0VFX4 171 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 AIMP2Q13155 320 aaKnown RBP15.83■□□□□ 0.12
PTPRK-208ENST00000392449 ANKRD20A4Q4UJ75 823 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 PRAMEF13Q5VWM6 474 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 IGFL3Q6UXB1 125 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 REXO1L1PQ8IX06 675 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 AMER2Q8N7J2 671 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 MAGOHBQ96A72 148 aaKnown RBP15.83■□□□□ 0.12
PTPRK-208ENST00000392449 C8orf44Q96CB5 159 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 ENAMQ9NRM1 1142 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 HOMER3Q9NSC5 361 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 SAMD15Q9P1V8 674 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 TAC3Q9UHF0 121 aa15.83■□□□□ 0.12
PTPRK-208ENST00000392449 ZCWPW2A0A1B0GU75 182 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 A1L4Q6 167 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 VSTM2BA6NLU5 285 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 H0YGG7 62 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 H3BMM5 538 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 MYO1CO00159 1063 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 KIF5CO60282 957 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 SRPX2O60687 465 aaPredicted RBP15.82■□□□□ 0.12
PTPRK-208ENST00000392449 USP1O94782 785 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 FKBP9O95302 570 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 IGHEP01854 428 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 PIM1P11309 404 aaPredicted RBP15.82■□□□□ 0.12
PTPRK-208ENST00000392449 CMPK1P30085 196 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 RPA3P35244 121 aaPredicted RBP15.82■□□□□ 0.12
PTPRK-208ENST00000392449 SOX8P57073 446 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 ARF3P61204 181 aaPredicted RBP15.82■□□□□ 0.12
PTPRK-208ENST00000392449 SNRPNP63162 240 aaKnown RBP15.82■□□□□ 0.12
PTPRK-208ENST00000392449 KLC1Q07866 573 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 RBBP7Q16576 425 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 HKDC1Q2TB90 917 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 FAM214AQ32MH5 1076 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 VWA2Q5GFL6 755 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 YOD1Q5VVQ6 348 aaPredicted RBP15.82■□□□□ 0.12
PTPRK-208ENST00000392449 ZADH2Q8N4Q0 377 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 OR11G2Q8NGC1 345 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 STT3BQ8TCJ2 826 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 MAGEC3Q8TD91 643 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 SSC4DQ8WTU2 575 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 SERPINB12Q96P63 405 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 ZFYVE21Q9BQ24 234 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 CRB3Q9BUF7 120 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 ZNF304Q9HCX3 659 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 MRPS30Q9NP92 439 aaKnown RBP15.82■□□□□ 0.12
PTPRK-208ENST00000392449 MRFAP1Q9Y605 127 aa15.82■□□□□ 0.12
PTPRK-208ENST00000392449 FAM237BA0A1B0GVD1 139 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 CTAGE9A4FU28 777 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 SLC16A8O95907 504 aa15.81■□□□□ 0.12
PTPRK-208ENST00000392449 STATHP02808 62 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms