RNA–Protein interactions for RNA: ENST00000391141.1

SNORA53-201, Transcript of small nucleolar RNA, H/ACA box 53, humanhuman

BASIC

Gene SNORA53, Length 249 nt, Biotype snoRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA53-201ENST00000391141 UTF1Q5T230 341 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 GARNL3Q5VVW2 1013 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 LCLAT1Q6UWP7 414 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 IGFL3Q6UXB1 125 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 CHST9Q7L1S5 443 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 MAML2Q8IZL2 1156 aaPredicted RBP1.33□□□□□ -2.2
SNORA53-201ENST00000391141 CDK20Q8IZL9 346 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 AFAP1Q8N556 730 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 CCDC185Q8N715 623 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 PCYOX1LQ8NBM8 494 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 SLC37A3Q8NCC5 494 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 OR10G7Q8NGN6 311 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 PIGBQ92521 554 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 B3GALT6Q96L58 329 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 C7orf26Q96N11 449 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 PSMB7Q99436 277 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 YTHDF1Q9BYJ9 559 aaKnown RBP1.33□□□□□ -2.2
SNORA53-201ENST00000391141 SPATC1LQ9H0A9 340 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 SH2D4AQ9H788 454 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 TLE6Q9H808 572 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 MTHFD2LQ9H903 347 aaPredicted RBP1.33□□□□□ -2.2
SNORA53-201ENST00000391141 TRPV4Q9HBA0 871 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 GPN1Q9HCN4 374 aaPredicted RBP1.33□□□□□ -2.2
SNORA53-201ENST00000391141 GKN1Q9NS71 199 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 NTNG1Q9Y2I2 539 aa1.33□□□□□ -2.2
SNORA53-201ENST00000391141 TDRD9Q8NDG6 1382 aaKnown RBP1.33□□□□□ -2.2
SNORA53-201ENST00000391141 FAM168BA1KXE4 195 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 C2CD4DB7Z1M9 353 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 ECE2O60344 883 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 RNASEH2AO75792 299 aaKnown RBP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 RENP00797 406 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 THY1P04216 161 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 SMIM18P0DKX4 95 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 HAPLN1P10915 354 aaPredicted RBP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 JAK1P23458 1154 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 MAPK4P31152 587 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 CSTF2P33240 577 aaKnown RBP eCLIP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 ATP4BP51164 291 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 LBX1P52954 281 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 IRF3Q14653 427 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 TMEM132DQ14C87 1099 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 GPR33Q49SQ1 333 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 TMEM154Q6P9G4 183 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 ZER1Q7Z7L7 766 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 MMD2Q8IY49 270 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 OR5T2Q8NGG2 359 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 TDRD7Q8NHU6 1098 aaKnown RBP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 MIS12Q9H081 205 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 HRH4Q9H3N8 390 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 TBC1D17Q9HA65 648 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 CLEC5AQ9NY25 188 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 SEC63Q9UGP8 760 aaKnown RBP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 ZNF148Q9UQR1 794 aa1.32□□□□□ -2.2
SNORA53-201ENST00000391141 ZNFX1Q9P2E3 1918 aaKnown RBP1.32□□□□□ -2.2
SNORA53-201ENST00000391141 MYO1GB0I1T2 1018 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TRAFD1O14545 582 aaPredicted RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 PRAMEF11O60813 436 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 LY6G6DO95868 133 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TBX18O95935 607 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 DANCRP0C864 163 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 PCP11498 1178 aaKnown RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 FDPSP14324 419 aaKnown RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 MGMTP16455 207 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 LMAN1P49257 510 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 PNLIPRP2P54317 469 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 KRTAP10-10P60014 251 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 HNRNPKP61978 463 aaKnown RBP eCLIP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TMF1P82094 1093 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 FKBP3Q00688 224 aaKnown RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 ITGA7Q13683 1181 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 KRT33BQ14525 404 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 DHX8Q14562 1220 aaKnown RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 RFTN1Q14699 578 aaPredicted RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 PTPN14Q15678 1187 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 ZNF79Q15937 498 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 Q1RN00 199 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 ATAD3CQ5T2N8 411 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 RNASEH2BQ5TBB1 312 aaKnown RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 RSBN1Q5VWQ0 802 aaPredicted RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TMCO3Q6UWJ1 677 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TEX11Q8IYF3 940 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 CPXCR1Q8N123 301 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 PDILTQ8N807 584 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TDRD5Q8NAT2 981 aaKnown RBP1.31□□□□□ -2.2
SNORA53-201ENST00000391141 OR10Q1Q8NGQ4 319 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 SSMEM1Q8WWF3 244 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 NSMAFQ92636 917 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 C11orf52Q96A22 123 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TBATAQ96M53 351 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 ZNF285Q96NJ3 590 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 CCDC3Q9BQI4 270 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 TEX13BQ9BXU2 312 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 DNAI2Q9GZS0 605 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 Q9H8V8 135 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 JPT2Q9H910 190 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 DIAPH3Q9NSV4 1193 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 ZNF69Q9UC07 566 aa1.31□□□□□ -2.2
SNORA53-201ENST00000391141 NACAE9PAV3 2078 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms