RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 HSMCR30P0CW71 290 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 STOMP27105 288 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PSMB4P28070 264 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PON3Q15166 354 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 UNQ6126/PRO20091Q6UXV3 157 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 NUAK1O60285 661 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SLC22A15Q8IZD6 547 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FBXL6Q8N531 539 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 JAG2Q9Y219 1238 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CDHR4A6H8M9 788 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SLC22A31A6NKX4 558 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ACOT8O14734 319 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 KRT77Q7Z794 578 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PQLC3Q8N755 202 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 OR56A1Q8NGH5 318 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FAAHO00519 579 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FFAR2O15552 330 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 WSCD1Q658N2 575 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TIPARPQ7Z3E1 657 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 CLHC1Q8NHS4 586 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 GTPBP2Q9BX10 602 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 FAM49AQ9H0Q0 323 aaPredicted RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 DUSP21Q9H596 190 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 A0A1W2PPW3 197 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 B8ZZF3 427 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ARCN1P48444 511 aaKnown RBP4.82□□□□□ -1.64
PCDH9-201ENST00000377861 PHC1P78364 1004 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 NPRL3Q12980 569 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TPRG1Q6ZUI0 275 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 ZDHHC21Q8IVQ6 265 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 TIGD4Q8IY51 512 aa4.82□□□□□ -1.64
PCDH9-201ENST00000377861 SMIM5Q71RC9 77 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 OMDQ99983 421 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GRIP2Q9C0E4 1043 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 RNF220Q5VTB9 566 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PTAR1Q7Z6K3 402 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PIP5K1AQ99755 562 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 FAM105AQ9NUU6 356 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ABRACLQ9P1F3 81 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PFDN2Q9UHV9 154 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TRIM64A6NGJ6 449 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 C1QTNF3-AMACRE9PGA6 284 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 M0QZQ0 153 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF37AP17032 561 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 BOP1Q14137 746 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GCNT6Q5T4J0 391 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GLYATL1P3A0A0U1RQE8 302 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 DCLK1O15075 740 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MMAAQ8IVH4 418 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TFAP2BQ92481 460 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MROQ9BYG7 248 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SLC24A3Q9HC58 644 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TREX1Q9NSU2 369 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 KIF1AQ12756 1690 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 A0A0A6YYH2 397 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 A6NJ64 397 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TRIM64CA6NLI5 447 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CD36P16671 472 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 HLA-DMAP28067 261 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GBX1Q14549 363 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 UBAP2Q5T6F2 1119 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZBED3Q96IU2 234 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF587Q96SQ5 575 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SEPT4O43236 478 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 HTRA2O43464 458 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 FGF3P11487 239 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 LAG3P18627 525 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SLC9A3P48764 834 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GTF2H2Q13888 395 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 AAK1Q2M2I8 961 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 PGS1Q32NB8 556 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GTF2H2CQ6P1K8 395 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MEIOBQ8N635 442 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TXNDC15Q96J42 360 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CIB1Q99828 191 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CPVLQ9H3G5 476 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 XPNPEP1Q9NQW7 623 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 OR14I1A6ND48 311 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 MYCLP1P12525 358 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ALDH6A1Q02252 535 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ARMC6Q6NXE6 501 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CMIPQ8IY22 773 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 FAM118AQ9NWS6 357 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CCNB2O95067 398 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ANXA4P09525 319 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 UFD1Q92890 307 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ASB8Q9H765 288 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 TCRBV5S1A1TA0A578 114 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 OR52K2Q8NGK3 314 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 DIRAS2Q96HU8 199 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SAMD11Q96NU1 681 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SLC25A21Q9BQT8 299 aaPredicted RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 APOBEC3GQ9HC16 384 aaKnown RBP4.81□□□□□ -1.64
PCDH9-201ENST00000377861 IGLON5A6NGN9 336 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ZNF682O95780 498 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 ALPLP05186 524 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CCR8P51685 355 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 SELENOWP63302 87 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 CYP4F3Q08477 520 aa4.81□□□□□ -1.64
PCDH9-201ENST00000377861 GPR149Q86SP6 731 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms