RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 VPS29Q9UBQ0 182 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 LRRK1Q38SD2 2015 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 TRBV5-3A0A0A0MS03 114 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 H3BM21 787 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 PBX2P40425 430 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 RPS9P46781 194 aaKnown RBP19.61■□□□□ 0.73
VSX1-202ENST00000376709 ROR2Q01974 943 aaKnown RBP19.61■□□□□ 0.73
VSX1-202ENST00000376709 ELP6Q0PNE2 266 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 HNRNPA1L2Q32P51 320 aaKnown RBP19.61■□□□□ 0.73
VSX1-202ENST00000376709 LRIF1Q5T3J3 769 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 RBM44Q6ZP01 1051 aaKnown RBP19.61■□□□□ 0.73
VSX1-202ENST00000376709 TRAPPC5Q8IUR0 188 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 SYT12Q8IV01 421 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 NUS1Q96E22 293 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 INPP5KQ9BT40 448 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 ZCCHC2Q9C0B9 1178 aaKnown RBP19.61■□□□□ 0.73
VSX1-202ENST00000376709 MAN2B2Q9Y2E5 1009 aa19.61■□□□□ 0.73
VSX1-202ENST00000376709 ATG2AQ2TAZ0 1938 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 EDDM13A0A1B0GTR0 161 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 OTOL1A6NHN0 477 aaPredicted RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 H3BNH8 94 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 CXCR6O00574 342 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 SPINT1O43278 529 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 RECQL5O94762 991 aaPredicted RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 IMPA1P29218 277 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 NR1H2P55055 460 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 ZNF33BQ06732 778 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 SLC36A3Q495N2 470 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 C9orf64Q5T6V5 341 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 ATG9BQ674R7 924 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 RAET1GQ6H3X3 334 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 TMEM214Q6NUQ4 689 aaKnown RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 WDR20Q8TBZ3 569 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 FAM120BQ96EK7 910 aaKnown RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 SAMD11Q96NU1 681 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 PKP4Q99569 1192 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 K7ESM1 405 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 B3GALT4O96024 378 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 PRPS1L1P21108 318 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 MYF6P23409 242 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 HNF4AP41235 474 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 KIR3DL1P43629 444 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 ELAVL3Q14576 367 aaKnown RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 SHHQ15465 462 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 ADRM1Q16186 407 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 DUSP6Q16828 381 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 OTUD3Q5T2D3 398 aaPredicted RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 ENPP6Q6UWR7 440 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 MICU2Q8IYU8 434 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 TRIML2Q8N7C3 387 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 FAM86B1Q8N7N1 296 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 TMIEQ8NEW7 156 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 ARRDC3Q96B67 414 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 NMD3Q96D46 503 aaKnown RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 DGCR14Q96DF8 476 aaKnown RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 ASB16Q96NS5 453 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 OR4K3Q96R72 315 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 OR2AG1Q9H205 316 aa19.6■□□□□ 0.73
VSX1-202ENST00000376709 CLK4Q9HAZ1 481 aaKnown RBP19.6■□□□□ 0.73
VSX1-202ENST00000376709 C2orf16Q68DN1 1984 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 CCDC160A6NGH7 325 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 PLK4O00444 970 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 RFXANKO14593 260 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 SCELO95171 688 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 SOD1P00441 154 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 GPR1P46091 355 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 CWF19L1Q69YN2 538 aaKnown RBP19.59■□□□□ 0.73
VSX1-202ENST00000376709 OR4F3Q6IEY1 312 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 GRHL2Q6ISB3 625 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 CFAP206Q8IYR0 622 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 KIAA1958Q8N8K9 716 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 CDC26Q8NHZ8 85 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 ZFAND2BQ8WV99 257 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 FGF13Q92913 245 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 PPP1R16AQ96I34 528 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 CPPED1Q9BRF8 314 aaPredicted RBP19.59■□□□□ 0.73
VSX1-202ENST00000376709 EPHX3Q9H6B9 360 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 SGK2Q9HBY8 427 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 ZNF639Q9UID6 485 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 FAM220BPB1ANY3 271 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 LZTS3O60299 673 aaPredicted RBP19.59■□□□□ 0.73
VSX1-202ENST00000376709 C6P13671 934 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 ADRB3P13945 408 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 CDKN2CP42773 168 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 MTHFRP42898 656 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 ACSM2AQ08AH3 577 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 ACSM2BQ68CK6 577 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 TTC33Q6PID6 262 aaPredicted RBP19.59■□□□□ 0.73
VSX1-202ENST00000376709 GET4Q7L5D6 327 aaPredicted RBP19.59■□□□□ 0.73
VSX1-202ENST00000376709 NLRP8Q86W28 1048 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 ZNF786Q8N393 782 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 DHRSXQ8N5I4 330 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 SLC47A1Q96FL8 570 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 CD320Q9NPF0 282 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 DYRK4Q9NR20 520 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 GPRC5BQ9NZH0 403 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 COMMD3-BMI1R4GMX3 469 aa19.59■□□□□ 0.73
VSX1-202ENST00000376709 H0YIV9 168 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 VILLO15195 856 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 MMP20O60882 483 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms