RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 TMED5Q9Y3A6 229 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 PLEKHM1Q9Y4G2 1056 aa17.1■□□□□ 0.33
CTTN-203ENST00000376561 MAN2B1O00754 1011 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 ACOT8O14734 319 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 MAP3K7O43318 606 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 KCNJ13O60928 360 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 HOXC4P09017 264 aaPredicted RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 ERGP11308 486 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 PTDSS1P48651 473 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 SESN3P58005 492 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 TFF2Q03403 129 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 FOXM1Q08050 763 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 DDX39BQ13838 428 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 MLF2Q15773 248 aaPredicted RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 TBC1D21Q8IYX1 336 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 GLB1L3Q8NCI6 653 aaPredicted RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 OR7G3Q8NG95 312 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 SETD7Q8WTS6 366 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 ASB9Q96DX5 294 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 ZBTB18Q99592 522 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 TRIT1Q9H3H1 467 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 SPATA6Q9NWH7 488 aaPredicted RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 EBF1Q9UH73 591 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 GPSM3Q9Y4H4 160 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 PRR19A6NJB7 356 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 H0Y8X5 98 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 FPGTO14772 594 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 BCAS2O75934 225 aaPredicted RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 C1GALT1C1LP0DN25 315 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 AMD1P17707 334 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 HNRNPA2B1P22626 353 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 SLC6A2P23975 617 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 DGKQP52824 942 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 KIAA1024LP59773 190 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 TRIM25Q14258 630 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 ARHGAP19Q14CB8 494 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 THEMIS2Q5TEJ8 643 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 ATG9BQ674R7 924 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 ADNP2Q6IQ32 1131 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 DUS1LQ6P1R4 473 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 SLC5A11Q8WWX8 675 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 C12orf66Q96MD2 445 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 INSM2Q96T92 566 aaPredicted RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 MENTQ9BUN1 341 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 EHD1Q9H4M9 534 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 EBF2Q9HAK2 575 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 BRF2Q9HAW0 419 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 USP36Q9P275 1121 aaKnown RBP17.09■□□□□ 0.33
CTTN-203ENST00000376561 VPS29Q9UBQ0 182 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 BCAP29Q9UHQ4 241 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 CA5BQ9Y2D0 317 aa17.09■□□□□ 0.33
CTTN-203ENST00000376561 PCM1Q15154 2024 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 PRSS38A1L453 326 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 NME4O00746 187 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 CHRNB1P11230 501 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 PRPS2P11908 318 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 HSD3B1P14060 373 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 ANPEPP15144 967 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 ACPPP15309 386 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 HSD3B2P26439 372 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 RGS19P49795 217 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 YBX1P67809 324 aaKnown RBP17.08■□□□□ 0.33
CTTN-203ENST00000376561 PRAMEF14Q5SWL7 426 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 PRAMEF13Q5VWM6 474 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 MED27Q6P2C8 311 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 SLC2A7Q6PXP3 512 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 ZNF852Q6ZMS4 543 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 SLC15A3Q8IY34 581 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 C2orf73Q8N5S3 287 aaPredicted RBP17.08■□□□□ 0.33
CTTN-203ENST00000376561 DPP10Q8N608 796 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 KRTCAP2Q8N6L1 136 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 CLHC1Q8NHS4 586 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 BMFQ96LC9 184 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 APOLD1Q96LR9 279 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 EFCAB11Q9BUY7 163 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 CLMPQ9H6B4 373 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 POLMQ9NP87 494 aaPredicted RBP17.08■□□□□ 0.33
CTTN-203ENST00000376561 SLAMF8Q9P0V8 285 aa17.08■□□□□ 0.33
CTTN-203ENST00000376561 MAGEB17A8MXT2 336 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 NPPAP01160 153 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 PCNAP12004 261 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 MAPK1P28482 360 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 HSD17B2P37059 387 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 SLBPQ14493 270 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTTN-203ENST00000376561 LCTLQ6UWM7 567 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■□□□□ 9.8
CTTN-203ENST00000376561 PGBD3Q8N328 593 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 HUS1BQ8NHY5 278 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 NRTNQ99748 197 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 GEMIN8Q9NWZ8 242 aaKnown RBP17.08■□□□□ 0.32
CTTN-203ENST00000376561 ANGPTL2Q9UKU9 493 aa17.08■□□□□ 0.32
CTTN-203ENST00000376561 SEMA4FO95754 770 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 SDC1P18827 310 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 IDSP22304 550 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 TACR1P25103 407 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 GCKP35557 465 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 DGKEP52429 567 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 ATXN3P54252 364 aaPredicted RBP17.07■□□□□ 0.32
CTTN-203ENST00000376561 CLDN8P56748 225 aa17.07■□□□□ 0.32
CTTN-203ENST00000376561 NFATC4Q14934 902 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms