RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SOX17Q9H6I2 414 aaPredicted RBP13.61□□□□□ -0.23
NELFE-201ENST00000375425 ZBTB20Q9HC78 741 aaPredicted RBP13.61□□□□□ -0.23
NELFE-201ENST00000375425 STOX2Q9P2F5 926 aaPredicted RBP13.61□□□□□ -0.23
NELFE-201ENST00000375425 MAP10Q9P2G4 905 aa13.61□□□□□ -0.23
NELFE-201ENST00000375425 CTSFQ9UBX1 484 aa13.61□□□□□ -0.23
NELFE-201ENST00000375425 USP9XQ93008 2570 aaPredicted RBP13.61□□□□□ -0.23
NELFE-201ENST00000375425 ZCWPW2A0A1B0GU75 182 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 OR2A25A4D2G3 310 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 TCP11X1B4DZS4 312 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 SOCS6O14544 535 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 PSIP1O75475 530 aaKnown RBP13.6□□□□□ -0.23
NELFE-201ENST00000375425 USP1O94782 785 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 MED26O95402 600 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 ITGA3P26006 1051 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 VARSP26640 1264 aaKnown RBP13.6□□□□□ -0.23
NELFE-201ENST00000375425 CMPK1P30085 196 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 AIMP2Q13155 320 aaKnown RBP13.6□□□□□ -0.23
NELFE-201ENST00000375425 CYP1B1Q16678 543 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 FHL5Q5TD97 284 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 ZNF470Q6ECI4 717 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 IGFL3Q6UXB1 125 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 DENND6AQ8IWF6 608 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 REXO1L1PQ8IX06 675 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 SMPDL3AQ92484 453 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 C19orf60Q96EN9 201 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 SERPINB12Q96P63 405 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 NAP1L3Q99457 506 aaPredicted RBP13.6□□□□□ -0.23
NELFE-201ENST00000375425 PKP4Q99569 1192 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 SLC30A3Q99726 388 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 ZFYVE21Q9BQ24 234 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 XAB2Q9HCS7 855 aaKnown RBP13.6□□□□□ -0.23
NELFE-201ENST00000375425 ZNF304Q9HCX3 659 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 FBXO6Q9NRD1 293 aaPredicted RBP13.6□□□□□ -0.23
NELFE-201ENST00000375425 FAM114A2Q9NRY5 505 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 FBXL4Q9UKA2 621 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 NXT1Q9UKK6 140 aaKnown RBP13.6□□□□□ -0.23
NELFE-201ENST00000375425 B3GNT3Q9Y2A9 372 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 FAM169AQ9Y6X4 670 aa13.6□□□□□ -0.23
NELFE-201ENST00000375425 NAV2Q8IVL1 2488 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 BLACEA4D250 179 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 VSTM2BA6NLU5 285 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 MYO1CO00159 1063 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 ALOX12BO75342 701 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 IPO13O94829 963 aaKnown RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 CATP04040 527 aaKnown RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 ERGP11308 486 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 RPA3P35244 121 aaPredicted RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 CUL1Q13616 776 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 TSTA3Q13630 321 aaPredicted RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 ARHGAP19Q14CB8 494 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 ZNF549Q6P9A3 640 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 KIRREL2Q6UWL6 708 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 RNF44Q7L0R7 432 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 AGGF1Q8N302 714 aaeCLIP13.59□□□□□ -0.23
NELFE-201ENST00000375425 ZADH2Q8N4Q0 377 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 CISD2Q8N5K1 135 aaKnown RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 SNRNP40Q96DI7 357 aaKnown RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 PLCD4Q9BRC7 762 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 SLC6A20Q9NP91 592 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 MRPS30Q9NP92 439 aaKnown RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 MED16Q9Y2X0 877 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 HS3ST3B1Q9Y662 390 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 USP9YO00507 2555 aaPredicted RBP13.59□□□□□ -0.23
NELFE-201ENST00000375425 ANKRD12Q6UB98 2062 aa13.59□□□□□ -0.23
NELFE-201ENST00000375425 IGKV1-8A0A0C4DH67 115 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 H0YGG7 62 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
NELFE-201ENST00000375425 KIF5CO60282 957 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 AGFG2O95081 481 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 GP1BBP13224 206 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 HSD17B2P37059 387 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 MAGEA3P43357 314 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 PNLIPRP1P54315 467 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 ARF3P61204 181 aaPredicted RBP13.58□□□□□ -0.24
NELFE-201ENST00000375425 PRDX1Q06830 199 aaKnown RBP13.58□□□□□ -0.24
NELFE-201ENST00000375425 MRPL49Q13405 166 aaKnown RBP13.58□□□□□ -0.24
NELFE-201ENST00000375425 NAA25Q14CX7 972 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 LONRF1Q17RB8 773 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 EIF2S3LQ2VIR3 472 aaKnown RBP13.58□□□□□ -0.24
NELFE-201ENST00000375425 TTLL9Q3SXZ7 439 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 PRAMEF13Q5VWM6 474 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 PRMT9Q6P2P2 845 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 CYHR1Q6ZMK1 362 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 NEK10Q6ZWH5 1172 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 PARP9Q8IXQ6 854 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 IQCKQ8N0W5 287 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 NAT8LQ8N9F0 302 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 PPFIBP2Q8ND30 876 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 STT3BQ8TCJ2 826 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 COG1Q8WTW3 980 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 ASB11Q8WXH4 323 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 TM9SF4Q92544 642 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 SIGLEC10Q96LC7 697 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 ILKAPQ9H0C8 392 aaPredicted RBP13.58□□□□□ -0.24
NELFE-201ENST00000375425 CCDC68Q9H2F9 335 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 LRRC4CQ9HCJ2 640 aa13.58□□□□□ -0.24
NELFE-201ENST00000375425 SEMA3GQ9NS98 782 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms