RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PRSS48Q7RTY5 328 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 HEATR4Q86WZ0 1026 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 RGL4Q8IZJ4 473 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 GLB1L3Q8NCI6 653 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ABCG8Q9H221 673 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 CLMPQ9H6B4 373 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 PARVBQ9HBI1 364 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 AMBNQ9NP70 447 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 KRT84Q9NSB2 600 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 WWOXQ9NZC7 414 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 IL37Q9NZH6 218 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 SAMHD1Q9Y3Z3 626 aaKnown RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 CCL27Q9Y4X3 112 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 LOC100506127A0A0U1RQW1 187 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 S100A3P33764 101 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 PPM1AP35813 382 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 LIPAP38571 399 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 CXCR4P61073 352 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 RSBN1Q5VWQ0 802 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SBSNQ6UWP8 590 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 LACC1Q8IV20 430 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 P3H2Q8IVL5 708 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 TMEM132CQ8N3T6 1108 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 OR52E4Q8NGH9 312 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 ELMO1Q92556 727 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 BADQ92934 168 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 CEP295NLQ96MC4 621 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 CPPED1Q9BRF8 314 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 HTATIP2Q9BUP3 242 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 ITPAQ9BY32 194 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 HOXD1Q9GZZ0 328 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 CAB39Q9Y376 341 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 TESMINQ9Y4I5 508 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 COL4A4P53420 1690 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 MYO16Q9Y6X6 1858 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 OR2A25A4D2G3 310 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 AGAP5A6NIR3 686 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 INSIG1O15503 277 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 FKBP9O95302 570 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SOD2P04179 222 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 COPZ1P61923 177 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 RTP2Q5QGT7 225 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 PTRHD1Q6GMV3 140 aaKnown RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 PHOSPHO2Q8TCD6 241 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 HERVK_113Q902F9 699 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SLC38A4Q969I6 547 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 FBXO32Q969P5 355 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 TSSK3Q96PN8 268 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 MGME1Q9BQP7 344 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 MMP27Q9H306 513 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 TP63Q9H3D4 680 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 FBXO44Q9H4M3 255 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SPG21Q9NZD8 308 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 UBA2Q9UBT2 640 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 NOX1Q9Y5S8 564 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SAGE2PA6NJ88 616 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 NT5C1B-RDH14C9J2C7 533 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SLC28A1O00337 649 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 AREL1O15033 823 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 LRATO95237 230 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 S100A5P33763 92 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 CLCN7P51798 805 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 PHC1P78364 1004 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 CREMQ03060 361 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 DMPKQ09013 629 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 ZNF181Q2M3W8 571 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 TPRG1LQ5T0D9 272 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 KDM4DQ6B0I6 523 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SLC8B1Q6J4K2 584 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 DOK6Q6PKX4 331 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SNX20Q7Z614 316 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 VTCN1Q7Z7D3 282 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 PDFQ9HBH1 243 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 ELOVL2Q9NXB9 296 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 SAMD4AQ9UPU9 718 aaKnown RBP10.79□□□□□ -0.68
CCDC40-203ENST00000374877 AP3M1Q9Y2T2 418 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 HSPE1-MOB4S4R3N1 261 aa10.79□□□□□ -0.68
CCDC40-203ENST00000374877 A0A096LPI6 279 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CLDN24A6NM45 220 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DRGXA6NNA5 263 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ERN1O75460 977 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 GJB5O95377 273 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 PRLP01236 227 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ESR1P03372 595 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 BCKDHAP12694 445 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 GADD45AP24522 165 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 C21orf33P30042 268 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CDKN2CP42773 168 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 NEK2P51955 445 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 IFITM2Q01629 132 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 NDUFA5Q16718 116 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 PRSS36Q5K4E3 855 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TMEM240Q5SV17 173 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 SPOUT1Q5T280 376 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 KIAA1614Q5VZ46 1190 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ZCCHC8Q6NZY4 707 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DDX53Q86TM3 631 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms