RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SCAMP1O15126 338 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 CSTBP04080 98 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 HK1P19367 917 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 DPYSL2Q16555 572 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 OCLNQ16625 522 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 AMZ1Q400G9 498 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 LGI4Q8N135 537 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 UBE2J2Q8N2K1 259 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 SLC29A3Q9BZD2 475 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 METTL8Q9H825 291 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 DTLQ9NZJ0 730 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 FNIP2Q9P278 1114 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 NPIPA1Q9UND3 350 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 RBMX2Q9Y388 322 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 LRRIQ1Q96JM4 1722 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 TEX13CA0A0J9YWL9 993 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 SAP18O00422 153 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 SCDO00767 359 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 CD36P16671 472 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 MERTKQ12866 999 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 SPAG16Q8N0X2 631 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 TOMM5Q8N4H5 51 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 ZSCAN4Q8NAM6 433 aaPredicted RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 KCT2Q8NC54 265 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 SNIP1Q8TAD8 396 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 NR4A3Q92570 626 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 COL21A1Q96P44 957 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 CENPMQ9NSP4 180 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 HYKKA2RU49 373 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 PPP1R11O60927 126 aaPredicted RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 C8BP07358 591 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 MECP2P51608 486 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 SMSP52788 366 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 OC90Q02509 493 aaPredicted RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 BLMHQ13867 455 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 PDGFRLQ15198 375 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 FBXO43Q4G163 708 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 SLC9A4Q6AI14 798 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 IRF2BP1Q8IU81 584 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 LRRC20Q8TCA0 184 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 POF1BQ8WVV4 589 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 TAMM41Q96BW9 452 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 HAS3O00219 553 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 H1F0P07305 194 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 DCKP27707 260 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 WSCD2Q2TBF2 565 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 RASGRP3Q8IV61 690 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 KCTD13Q8WZ19 329 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 ESAMQ96AP7 390 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 CERS4Q9HA82 394 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 ZIM2Q9NZV7 527 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 SIRPGQ9P1W8 387 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 NOCTQ9UK39 431 aaKnown RBP11.27□□□□□ -0.61
VCL-202ENST00000372755 NR2E1Q9Y466 385 aa11.27□□□□□ -0.61
VCL-202ENST00000372755 ZSCAN5BA6NJL1 495 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ACP5P13686 325 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ASPAP45381 313 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 OR12D2P58182 307 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 DSC3Q14574 896 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 SLC44A3Q8N4M1 653 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 YIPF7Q8N8F6 280 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 SH3RF2Q8TEC5 729 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 DENND1AQ8TEH3 1009 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 SLC32A1Q9H598 525 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 TMED5Q9Y3A6 229 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 A0A1W2PQ45 241 aaPredicted RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 A0A1W2PQY0 241 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 DPPA5A6NC42 116 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 SLC33A1O00400 549 aaPredicted RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 TNFRSF10BO14763 440 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ARL6IP5O75915 188 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 IFNA7P01567 189 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 MAGEA12P43365 314 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 GPR68Q15743 365 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 PITRM1Q5JRX3 1037 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 MARCH9Q86YJ5 346 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 NIPA2Q8N8Q9 360 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 FAM156AQ8NDB6 213 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 KLK6Q92876 244 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ZC3H10Q96K80 434 aaKnown RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 MAPKAP1Q9BPZ7 522 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 EBF3Q9H4W6 596 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 TRIM36Q9NQ86 728 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 OXSMQ9NWU1 459 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ENGP17813 658 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 LMO2P25791 158 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 TM4SF1P30408 202 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 MVKQ03426 396 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ALG10Q5BKT4 473 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 BRAT1Q6PJG6 821 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 LRRTM4Q86VH4 590 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ZNF101Q8IZC7 436 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 ARNTL2Q8WYA1 636 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 RIOK2Q9BVS4 552 aaKnown RBP11.26□□□□□ -0.61
VCL-202ENST00000372755 CTPS2Q9NRF8 586 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 PCDHB16Q9NRJ7 776 aa11.26□□□□□ -0.61
VCL-202ENST00000372755 YJEFN3A6XGL0 299 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms