RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CPSF6Q16630 551 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 ZCCHC8Q6NZY4 707 aaKnown RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 MBOAT1Q6ZNC8 495 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 P3H2Q8IVL5 708 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 PDLIM5Q96HC4 596 aaKnown RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 CINPQ9BW66 212 aaPredicted RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 OR51E2Q9H255 320 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 TNKS2Q9H2K2 1166 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 PARVBQ9HBI1 364 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 IL1RAPQ9NPH3 570 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 MOXD2PA6NHM9 499 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 A8MV72 311 aaPredicted RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 LOC730098B7Z3J9 87 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 TAF4O00268 1085 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 SEPT4O43236 478 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 PTTG1O95997 202 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 KRT8P05787 483 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 S100A3P33764 101 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 CTSKP43235 329 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 CRISP3P54108 245 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 PROX2Q3B8N5 592 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 GLB1L3Q8NCI6 653 aaPredicted RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 DPH2Q9BQC3 489 aaPredicted RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 CIPCQ9C0C6 399 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 MOV10Q9HCE1 1003 aaKnown RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 RIMKLBQ9ULI2 386 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 SNX6Q9UNH7 406 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 PCDHGA3Q9Y5H0 932 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 MANSC4A6NHS7 340 aaPredicted RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 SCAMP3O14828 347 aaKnown RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 IDH3BO43837 385 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 HSMCR30P0CW71 290 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 DNAJA1P31689 397 aaKnown RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 NPRL3Q12980 569 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 MBTPS1Q14703 1052 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 SLC24A5Q71RS6 500 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 ADAMTSL2Q86TH1 951 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 PLPP6Q8IY26 295 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 TMEM132CQ8N3T6 1108 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 CLDN19Q8N6F1 224 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 ULK4Q96C45 1275 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 EGLN2Q96KS0 407 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 KCNC2Q96PR1 638 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 CHCHD6Q9BRQ6 235 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 CENPOQ9BU64 300 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 TM9SF3Q9HD45 589 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 AASDHPPTQ9NRN7 309 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 DDX28Q9NUL7 540 aaKnown RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 WWOXQ9NZC7 414 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 SAMD4AQ9UPU9 718 aaKnown RBP14.4□□□□□ -0.1
COL9A2-202ENST00000372748 HSPE1-MOB4S4R3N1 261 aa14.4□□□□□ -0.1
COL9A2-202ENST00000372748 VWA8A3KMH1 1905 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 UPK3BL1B0FP48 263 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 UPK3BL2E5RIL1 263 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 AP3D1O14617 1153 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 FABP3P05413 133 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 TUBA1BP68363 451 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 CAMK2GQ13555 558 aaPredicted RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 TP53BP2Q13625 1128 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 TRIM71Q2Q1W2 868 aaKnown RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 USP39Q53GS9 565 aaKnown RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 TUBA1AQ71U36 451 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 AMER2Q8N7J2 671 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 MGME1Q9BQP7 344 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 OLA1Q9NTK5 396 aaKnown RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 ABT1Q9ULW3 272 aaKnown RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 VPS9D1Q9Y2B5 631 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 UGT2A1Q9Y4X1 527 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 ARIH1Q9Y4X5 557 aaPredicted RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 MTMR11A4FU01 709 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 AGRPO00253 132 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 CBX4O00257 560 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 KMOO15229 486 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 INSIG1O15503 277 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 TLL1O43897 1013 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 ERN1O75460 977 aaKnown RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 CCNDBP1O95273 360 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 IGLV3-27P01718 113 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 FPR1P21462 350 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 PAX3P23760 479 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 SLC19A1P41440 591 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 MAPKAPK2P49137 400 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 MAD2L1Q13257 205 aaPredicted RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 PNCKQ6P2M8 343 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 C16orf59Q7L2K0 433 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 DENND1CQ8IV53 801 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 LILRB4Q8NHJ6 448 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 TPD52L3Q96J77 140 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 BOCQ9BWV1 1114 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 GABARAPL1Q9H0R8 117 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 GPBP1L1Q9HC44 474 aaPredicted RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 THUMPD1Q9NXG2 353 aaKnown RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 UBA2Q9UBT2 640 aaPredicted RBP14.39□□□□□ -0.11
COL9A2-202ENST00000372748 BOLA1Q9Y3E2 137 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 N6AMT1Q9Y5N5 214 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 SNX8Q9Y5X2 465 aa14.39□□□□□ -0.11
COL9A2-202ENST00000372748 HAT1O14929 419 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 NBNO60934 754 aa14.38□□□□□ -0.11
COL9A2-202ENST00000372748 VNN2O95498 520 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms