RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 P4HTMQ9NXG6 502 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GPR83Q9NYM4 423 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 C5AR2Q9P296 337 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ANKMY1Q9P2S6 941 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MAP4K5Q9Y4K4 846 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 A6NL46 340 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CYSRT1A8MQ03 144 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 E5RI56 91 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 E7ENX8 843 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 AGPSO00116 658 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 DPM1O60762 260 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SLC16A8O95907 504 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IGHEP01854 428 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CATP04040 527 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MPC1LP0DKB6 136 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MMP11P24347 488 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 HSD17B2P37059 387 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SKIV2L2P42285 1042 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 VSX2P58304 361 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TAP2Q03519 686 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 RELAQ04206 551 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PRDX1Q06830 199 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 THOC5Q13769 683 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 UBAP2LQ14157 1087 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PRTGQ2VWP7 1150 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZNF425Q6IV72 752 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SUSD1Q6UWL2 747 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IGFL3Q6UXB1 125 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PAQR7Q86WK9 346 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GALNT16Q8N428 558 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ARHGEF39Q8N4T4 335 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CD200R1Q8TD46 325 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZNF480Q8WV37 535 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SMPDL3AQ92484 453 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PLCD4Q9BRC7 762 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 DPH7Q9BTV6 452 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZNF552Q9H707 407 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PLAC1Q9HBJ0 212 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 C20orf96Q9NUD7 363 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IRAK4Q9NWZ3 460 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PCYOX1Q9UHG3 505 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TSR3Q9UJK0 312 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 FBXO5Q9UKT4 447 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 COMMD10Q9Y6G5 202 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 NUP210LQ5VU65 1888 aa13.07□□□□□ -0.32
TNFRSF1A-202ENST00000366159 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 HYKKA2RU49 373 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CTAGE9A4FU28 777 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MASP2O00187 686 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 EIF3FO00303 357 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SOCS6O14544 535 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 DNALI1O14645 258 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PIM1P11309 404 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ENO3P13929 434 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GABRB3P28472 473 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CMPK1P30085 196 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 EMP3P54852 163 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MPP1Q00013 466 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CUL1Q13616 776 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PTK6Q13882 451 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MYBPC3Q14896 1274 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 NAA25Q14CX7 972 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TTLL9Q3SXZ7 439 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MSS51Q4VC12 460 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 HSP90AA5PQ58FG0 334 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 VWA5B1Q5TIE3 1220 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TTC29Q8NA56 475 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 C2CD4AQ8NCU7 369 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CALML6Q8TD86 181 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 INPP5DQ92835 1189 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 C10orf90Q96M02 699 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 OR2A5Q96R48 311 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GPR21Q99679 349 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZFYVE21Q9BQ24 234 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 AARSD1Q9BTE6 412 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ACAT2Q9BWD1 397 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CTSFQ9UBX1 484 aa13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZC3H7BQ9UGR2 993 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 USP9YO00507 2555 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SHANK1Q9Y566 2161 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 MAST4O15021 2626 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 HEATR5BQ9P2D3 2071 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IGLV3-12A0A075B6K2 115 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GOLGA6L10A0A0M3HER8 536 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TTLL8A6PVC2 850 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 H0YGG7 62 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PEX12O00623 359 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PGAM1P18669 254 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 OR1D4P47884 311 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ARF3P61204 181 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 DHX9Q08211 1270 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 RAPSNQ13702 412 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CRYMQ14894 314 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 CRB2Q5IJ48 1285 aa13.05□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ICE2Q659A1 982 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms