RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 YIPF4Q9BSR8 244 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ELL3Q9HB65 397 aaPredicted RBP13.38□□□□□ -0.27
VCP-201ENST00000358901 IGKV6-21A0A0C4DH24 114 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 FAM172BPA6NC97 362 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 WNT9AO14904 365 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 XPNPEP2O43895 674 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 DFNA5O60443 496 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 EBLN1P0CF75 366 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 DHRS4L1P0CG22 281 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ELK4P28324 431 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ARSDP51689 593 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 GPR17Q13304 367 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 DUOXA1Q1HG43 343 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 GJD3Q8N144 294 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 PNPLA1Q8N8W4 532 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 OR10H4Q8NGA5 316 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ARMC5Q96C12 935 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 ZFP3Q96NJ6 502 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 MED28Q9H204 178 aa13.38□□□□□ -0.27
VCP-201ENST00000358901 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 H3BNH8 94 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 LSM1O15116 133 aaKnown RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 SLC31A1O15431 190 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 EDIL3O43854 480 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 CDK6Q00534 326 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 LRRC70Q7Z2Q7 622 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 TRIM74Q86UV6 250 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 TRIM73Q86UV7 250 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 AMZ2Q86W34 360 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 LCN9Q8WX39 176 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 PPP1R14BQ96C90 147 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 HSH2DQ96JZ2 352 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 DHRS7Q9Y394 339 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 PRSS51A0A1B0GVH4 220 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 NOS1APO75052 506 aaPredicted RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 S1PR4O95977 384 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 KLK1P06870 262 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 CD1DP15813 335 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 ATP4BP51164 291 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 PDCD4Q53EL6 469 aaKnown RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 GDPD4Q6W3E5 623 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 OR8H1Q8NGG4 311 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 TSPEARQ8WU66 669 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 RMI1Q9H9A7 625 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 ADAP2Q9NPF8 381 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 ITM2CQ9NQX7 267 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 SPATA7Q9P0W8 599 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 RIMKLBQ9ULI2 386 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 CHD2O14647 1828 aaKnown RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 PRORSD1PA6NEY8 169 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 FOXD2O60548 495 aaPredicted RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 VIPP01282 170 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 XKP51811 444 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 CRISP3P54108 245 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 DSTNP60981 165 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 ARSIQ5FYB1 569 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 TPRG1LQ5T0D9 272 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 TPRG1Q6ZUI0 275 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 FAM129CQ86XR2 697 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 ARFGAP1Q8N6T3 406 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 ZNF563Q8TA94 476 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 C9orf43Q8TAL5 461 aaPredicted RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 RTP4Q96DX8 246 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 MIR1-1HGQ9H1L0 117 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 AKAP7Q9P0M2 348 aaPredicted RBP13.37□□□□□ -0.27
VCP-201ENST00000358901 PHF11Q9UIL8 331 aa13.37□□□□□ -0.27
VCP-201ENST00000358901 MTMR11A4FU01 709 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 MAFKO60675 156 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 TFPTP0C1Z6 253 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 EDNRBP24530 442 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 GKP32189 559 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 UMODL1-AS1Q8N2C9 162 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 OXR1Q8N573 874 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 UFD1Q92890 307 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 UTP4Q969X6 686 aaKnown RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 C12orf66Q96MD2 445 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 ZNF382Q96SR6 550 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 TLE6Q9H808 572 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 CALML5Q9NZT1 146 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 SORBS2O94875 1100 aaKnown RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 NPPAP01160 153 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 SLC35G6P0C7Q6 338 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 CMPK1P30085 196 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 MAT2AP31153 395 aaKnown RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 AVPR1BP47901 424 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 RORCP51449 518 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 OR2B6P58173 313 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 GMFBP60983 142 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 CRHR2Q13324 411 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 KLHL22Q53GT1 634 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 ZNF311Q5JNZ3 666 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 KIAA1161Q6NSJ0 714 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 PEG10Q86TG7 708 aaKnown RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 PEX5LQ8IYB4 626 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 KLK6Q92876 244 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms