RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 BOLA2-SMG1P6H3BVE0 249 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CLDN4O14493 209 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC9A3R1O14745 358 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 ARPC2O15144 300 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 STBD1O95210 358 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 OPN1SWP03999 348 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PTPRAP18433 802 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 LUMP51884 338 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PPP1R8Q12972 351 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 CYP1B1Q16678 543 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF557Q8N988 423 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 SCGB1C1Q8TD33 95 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 COPS5Q92905 334 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 HCN2Q9UL51 889 aa10.79□□□□□ -0.68
GTF3C1-201ENST00000356183 SSX4O60224 188 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 RAB36O95755 333 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 JAM2P57087 298 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF280BQ86YH2 543 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 LGI4Q8N135 537 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 SLC44A3Q8N4M1 653 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF611Q8N823 705 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 AQP11Q8NBQ7 271 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 USP29Q9HBJ7 922 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PNO1Q9NRX1 252 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 COPS7AQ9UBW8 275 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 STXBP5LQ9Y2K9 1186 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PCDHGB5Q9Y5G0 923 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 MROH1Q8NDA8 1641 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PPLO60437 1756 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 AGLP35573 1532 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 H0YGN5 161 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 GRM6O15303 877 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 CHRM1P11229 460 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 VEGFAP15692 232 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ENGP17813 658 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 NFKB2Q00653 900 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 LRRC58Q96CX6 371 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 HMCESQ96FZ2 354 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 TMEM80Q96HE8 168 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 TREX2Q9BQ50 279 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 HEPHQ9BQS7 1158 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 TPT1P8Q9HAU6 139 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 MKKSQ9NPJ1 570 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 TMEM59LQ9UK28 342 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 NFS1Q9Y697 457 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 FAM234BA2RU67 622 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 CLCN2P51788 898 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 RPS14P62263 151 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ASTE1Q2TB18 679 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PRAMEF19Q5SWL8 479 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 SERPINA9Q86WD7 417 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 RANBP3Q9H6Z4 567 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 C14orf119Q9NWQ9 140 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 OTOL1A6NHN0 477 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 AP2A1O95782 977 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 CSTBP04080 98 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 GSTT2P0CG29 244 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 SMIM10L2AP0DMW4 78 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 SMIM10L2BP0DMW5 78 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 MAELQ96JY0 434 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PKP4Q99569 1192 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 RNF6Q9Y252 685 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ZFP37Q9Y6Q3 630 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF670-ZNF695F2Z2N8 137 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 M0R129 80 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 TOXO94900 526 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 EPCAMP16422 314 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PRKACAP17612 351 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 CXCR1P25024 350 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PLA2G16P53816 162 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 HADHBP55084 474 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 CDK10Q15131 360 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 SEC23BQ15437 767 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 GPR68Q15743 365 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ECM1Q16610 540 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ZDHHC20Q5W0Z9 365 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 GPR139Q6DWJ6 353 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 METTL3Q86U44 580 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 ZNF709Q8N972 641 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 NFKBIDQ8NI38 313 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 NKD2Q969F2 451 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 S100A16Q96FQ6 103 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 CLCA1A8K7I4 914 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 B4GALT5O43286 388 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 DIRAS1O95057 198 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 NKX2-5P52952 324 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 GNG2P59768 71 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PTP4A2Q12974 167 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 MOGQ16653 247 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 SFT2D3Q587I9 215 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 GPR135Q8IZ08 494 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 PYROXD2Q8N2H3 581 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 CREB3L1Q96BA8 519 aa10.78□□□□□ -0.68
GTF3C1-201ENST00000356183 DUSP26Q9BV47 211 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms