RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TRMT10BQ6PF06 316 aaKnown RBP16■□□□□ 0.15
PDLIM7-201ENST00000355572 PAQR7Q86WK9 346 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
PDLIM7-201ENST00000355572 C2CD4AQ8NCU7 369 aaPredicted RBP16■□□□□ 0.15
PDLIM7-201ENST00000355572 OR2Y1Q8NGV0 311 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 GSDMBQ8TAX9 411 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 GRK7Q8WTQ7 553 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 ASB11Q8WXH4 323 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 SEC14L1Q92503 715 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 KCNJ9Q92806 393 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 FOPNLQ96NB1 174 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 SELENOSQ9BQE4 189 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 NDC1Q9BTX1 674 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 RAB11FIP5Q9BXF6 653 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 TXLNGQ9NUQ3 528 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 NDOR1Q9UHB4 597 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 TAC3Q9UHF0 121 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 SRPK3Q9UPE1 567 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 PCDHGA9Q9Y5G4 932 aaKnown RBP16■□□□□ 0.15
PDLIM7-201ENST00000355572 MAU2Q9Y6X3 613 aa16■□□□□ 0.15
PDLIM7-201ENST00000355572 A0A1B0GX78 115 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 TARM1B6A8C7 271 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 E7ENX8 843 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 GFYI3L273 518 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 FFAR3O14843 346 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 DSCR3O14972 297 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 GPR42O15529 346 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 ONECUT2O95948 504 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 STATHP02808 62 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 PGAM1P18669 254 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 IMPA1P29218 277 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 FOLR3P41439 243 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 EFNA3P52797 238 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 PNLIPRP1P54315 467 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 CDKN2DP55273 166 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 GNG11P61952 73 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 TAP2Q03519 686 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 TSTA3Q13630 321 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 BBS9Q3SYG4 887 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 ZNF425Q6IV72 752 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 TTC23LQ6PF05 361 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 NEK10Q6ZWH5 1172 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 PLD3Q8IV08 490 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 ARHGEF39Q8N4T4 335 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 RBMXL3Q8N7X1 1067 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 Q8NA96 180 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 MIB2Q96AX9 1013 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 EBNA1BP2Q99848 306 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 DHRS4Q9BTZ2 278 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 SOX17Q9H6I2 414 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 ZBTB20Q9HC78 741 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 IKZF3Q9UKT9 509 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 CHMP2BQ9UQN3 213 aa15.99■□□□□ 0.15
PDLIM7-201ENST00000355572 GOLGA6L10A0A0M3HER8 536 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 H0YGG7 62 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 P2RX6O15547 441 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 TTI1O43156 1089 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 AHSGP02765 367 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 MPC1LP0DKB6 136 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 TCP1P17987 556 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 ELK3P41970 407 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 CARSP49589 748 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 ARF3P61204 181 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 SSPNQ14714 243 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 FASTKD3Q14CZ7 662 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 NKG7Q16617 165 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 HKDC1Q2TB90 917 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 PRTGQ2VWP7 1150 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 ZC3H12BQ5HYM0 836 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 HIBCHQ6NVY1 386 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 EEF1AKMT1Q8WVE0 214 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 SMPDL3AQ92484 453 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 INPP5DQ92835 1189 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 ZUFSPQ96AP4 578 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 PLCD4Q9BRC7 762 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 MFRPQ9BY79 579 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 INTS7Q9NVH2 962 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 P4HTMQ9NXG6 502 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 ZC3H7BQ9UGR2 993 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 GPN3Q9UHW5 284 aaPredicted RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 MRPS2Q9Y399 296 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 DOPEY2Q9Y3R5 2298 aa15.98■□□□□ 0.15
PDLIM7-201ENST00000355572 SOCS6O14544 535 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 SORBS2O94875 1100 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 TSPAN12O95859 305 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 SYF2O95926 243 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 CATP04040 527 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 EIF2S1P05198 315 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 SKIV2L2P42285 1042 aaKnown RBP15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 UQCRFS1P47985 274 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 PGDP52209 483 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 PHKG1Q16816 387 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 DCAF10Q5QP82 559 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 ICE2Q659A1 982 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 PAQR3Q6TCH7 311 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 OVCH1Q7RTY7 1134 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 RAB43Q86YS6 212 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 CNTN4Q8IWV2 1026 aa15.97■□□□□ 0.15
PDLIM7-201ENST00000355572 TEX19Q8NA77 164 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms