RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 DTWD1Q8N5C7 304 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
HMGN3-202ENST00000344726 PPFIBP2Q8ND30 876 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 PROKR1Q8TCW9 393 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 SEC14L1Q92503 715 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 DLG3Q92796 817 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 ZUFSPQ96AP4 578 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 CFAP36Q96G28 342 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 ZNF285Q96NJ3 590 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 NAT9Q9BTE0 207 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 ING2Q9H160 280 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 SYNPO2LQ9H987 977 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 SLC6A20Q9NP91 592 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 SLC22A11Q9NSA0 550 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 INTS7Q9NVH2 962 aaKnown RBP13.83□□□□□ -0.2
HMGN3-202ENST00000344726 IRAK4Q9NWZ3 460 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 TARM1B6A8C7 271 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 VPS26AO75436 327 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 MED26O95402 600 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 ENO3P13929 434 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-202ENST00000344726 AGXTP21549 392 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 PNLIPRP1P54315 467 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 DCDP81605 110 aaKnown RBP13.82□□□□□ -0.2
HMGN3-202ENST00000344726 FOXK1P85037 733 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 KLRB1Q12918 225 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 FASTKD3Q14CZ7 662 aaKnown RBP13.82□□□□□ -0.2
HMGN3-202ENST00000344726 HIF1AQ16665 826 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 MLIPQ5VWP3 458 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 ANKMY2Q8IV38 441 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 LRRC56Q8IYG6 542 aaPredicted RBP13.82□□□□□ -0.2
HMGN3-202ENST00000344726 ZNF480Q8WV37 535 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 EEF1AKMT1Q8WVE0 214 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 SMPDL3AQ92484 453 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 SNF8Q96H20 258 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 NDC1Q9BTX1 674 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 MLXIPLQ9NP71 852 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 FAM114A2Q9NRY5 505 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
HMGN3-202ENST00000344726 ADAMTS6Q9UKP5 1117 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 SNX24Q9Y343 169 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 HECTD1Q9ULT8 2610 aa13.82□□□□□ -0.2
HMGN3-202ENST00000344726 LOC105369274A0A096LPK9 316 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 LOC102723532A0A0G2JNH3 316 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 A0A0J9YVX5 310 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 OR2A25A4D2G3 310 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 C9J4A7 227 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 E7ENX8 843 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 MASP2O00187 686 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 SMAPO00193 183 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 CEACAM4O75871 244 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 IMPA1P29218 277 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 SKIV2L2P42285 1042 aaKnown RBP13.81□□□□□ -0.2
HMGN3-202ENST00000344726 CCL11P51671 97 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 VSX2P58304 361 aaPredicted RBP13.81□□□□□ -0.2
HMGN3-202ENST00000344726 TAP2Q03519 686 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 ATP1A4Q13733 1029 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 ARHGAP19Q14CB8 494 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 NKAIN1Q4KMZ8 207 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 ZC3H12BQ5HYM0 836 aaKnown RBP13.81□□□□□ -0.2
HMGN3-202ENST00000344726 MRPL14Q6P1L8 145 aaKnown RBP13.81□□□□□ -0.2
HMGN3-202ENST00000344726 FBXO42Q6P3S6 717 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 PAQR3Q6TCH7 311 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 KIAA0408Q6ZU52 694 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 TTLL10Q6ZVT0 673 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 UBE2R2Q712K3 238 aaPredicted RBP13.81□□□□□ -0.2
HMGN3-202ENST00000344726 RNF44Q7L0R7 432 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 OR4N4Q8N0Y3 316 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.81□□□□□ -0.2
HMGN3-202ENST00000344726 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 DPH7Q9BTV6 452 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 TAC3Q9UHF0 121 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 TRMT6Q9UJA5 497 aaKnown RBP13.81□□□□□ -0.2
HMGN3-202ENST00000344726 SCN3AQ9NY46 2000 aa13.81□□□□□ -0.2
HMGN3-202ENST00000344726 CNTRLQ7Z7A1 2325 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 FITM1A5D6W6 292 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 C2orf72A6NCS6 295 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 CYSRT1A8MQ03 144 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 E7ESA3 106 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 EIF3FO00303 357 aaPredicted RBP13.8□□□□□ -0.2
HMGN3-202ENST00000344726 SYF2O95926 243 aaKnown RBP13.8□□□□□ -0.2
HMGN3-202ENST00000344726 ALAS2P22557 587 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 CMPK1P30085 196 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
HMGN3-202ENST00000344726 MLLT10P55197 1068 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 ARL4CP56559 192 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 C2orf54Q08AI8 447 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 TSTA3Q13630 321 aaPredicted RBP13.8□□□□□ -0.2
HMGN3-202ENST00000344726 TCTE1Q5JU00 501 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 WASHC2DQ5SRD0 308 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 ICE2Q659A1 982 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 MBOAT1Q6ZNC8 495 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
HMGN3-202ENST00000344726 GALNT7Q86SF2 657 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms